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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA771359" and tax_phylum = "Fusobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Fusobacteriota · 11 ✖

tax_kingdom 1

bioproject 1

  • PRJNA771359 · 11 ✖

analysis 1

  • diamond · 11 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5850614 5850614 PRJNA771359_S_NODE_5105_length_152_cov_0.956522_g5022_i0 PRJNA771359 5105 152 0.956522 1.45391344 Cetobacterium sp. 8H 2759681 Bacteria Bacteria 97.8 3.78e-22   NR WP_185875891.1 2759681 g5022 i0 94 0.986842105263158 50 3 98.7 0 151 2 9 58 WP_185875891.1 DEAD/DEAH box helicase [Cetobacterium sp. 8H] diamond 150 97.8 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. 8H
7125796 7125796 PRJNA771359_S_NODE_4806_length_156_cov_0.983193_g4723_i0 PRJNA771359 4806 156 0.983193 1.53378108 unclassified Cetobacterium 2630983 Bacteria Bacteria 110 4.03e-27   NR WP_047381723.1 2630983 g4723 i0 100 1 52 0 100 0 1 156 253 304 WP_047381723.1 MULTISPECIES: dihydroorotase [unclassified Cetobacterium] diamond 156 110 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
14775969 14775969 PRJNA771359_S_NODE_592_length_406_cov_4.457995_g509_i0 PRJNA771359 592 406 4.457995 18.0994597 Cetobacterium sp. ZOR 2071632 Bacteria Bacteria 207 1.25e-66   NR WP_047395296.1 1339239 g509 i0 100 0.879310344827586 119 0 87.9 0 406 50 1 119 WP_047395296.1 hypothetical protein [Cetobacterium sp. ZOR0034] diamond 357 207 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. ZOR0034
24973625 24973625 PRJNA771359_S_NODE_1260_length_301_cov_2.450758_g1177_i0 PRJNA771359 1260 301 2.450758 7.37678158 Cetobacterium 180162 Bacteria Bacteria 181 8.45e-56   NR WP_023049584.1 180162 g1177 i0 92.8 0.966777408637874 97 7 96.7 0 298 8 20 116 WP_023049584.1 MULTISPECIES: ribosome hibernation-promoting factor, HPF/YfiA family [Cetobacterium] diamond 291 181 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
26863783 26863783 PRJNA771359_S_NODE_2141_length_228_cov_3.015707_g2058_i0 PRJNA771359 2141 228 3.015707 6.87581196 unclassified Cetobacterium 2630983 Bacteria Bacteria 159 3.33e-49   NR WP_052191840.1 2630983 g2058 i0 100 1 76 0 100 0 1 228 12 87 WP_052191840.1 MULTISPECIES: glutaredoxin domain-containing protein [unclassified Cetobacterium] diamond 228 159 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
27536852 27536852 PRJNA771359_S_NODE_3183_length_188_cov_2.039735_g3100_i0 PRJNA771359 3183 188 2.039735 3.8347018 Cetobacterium 180162 Bacteria Bacteria 130 1.16e-33   NR WP_297405033.1 527638 g3100 i0 98.4 1.97872340425532 62 1 98.9 0 187 2 222 283 WP_297405033.1 DEAD/DEAH box helicase [uncultured Cetobacterium sp.] diamond 372 130 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium uncultured Cetobacterium sp.
28663998 28663998 PRJNA771359_S_NODE_2387_length_217_cov_1.500000_g2304_i0 PRJNA771359 2387 217 1.5 3.255 unclassified Cetobacterium 2630983 Bacteria Bacteria 60.8 7.14e-10   NR WP_047381601.1 2630983 g2304 i0 100 0.746543778801843 54 0 74.7 0 3 164 39 92 WP_047381601.1 MULTISPECIES: hypothetical protein [unclassified Cetobacterium] diamond 162 60.8 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
30716692 30716692 PRJNA771359_S_NODE_2834_length_199_cov_2.851852_g2751_i0 PRJNA771359 2834 199 2.851852 5.67518548 unclassified Cetobacterium 2630983 Bacteria Bacteria 114 7.55e-32   NR WP_047384781.1 2630983 g2751 i0 100 0.904522613065327 60 0 90.5 0 199 20 2 61 WP_047384781.1 MULTISPECIES: hypothetical protein [unclassified Cetobacterium] diamond 180 114 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
31033035 31033035 PRJNA771359_S_NODE_3055_length_192_cov_2.000000_g2972_i0 PRJNA771359 3055 192 2 3.84 Cetobacterium sp. ZOR 2071632 Bacteria Bacteria 127 4.9999999999999986e-34   NR WP_047393833.1 1339239 g2972 i0 100 1 64 0 100 0 1 192 200 263 WP_047393833.1 DNA-directed RNA polymerase subunit alpha [Cetobacterium sp. ZOR0034] diamond 192 127 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. ZOR0034
31095841 31095841 PRJNA771359_S_NODE_4355_length_162_cov_2.704000_g4272_i0 PRJNA771359 4355 162 2.704 4.38048 unclassified Cetobacterium 2630983 Bacteria Bacteria 115 1.82e-31   NR WP_047383608.1 2630983 g4272 i0 100 1 54 0 100 0 1 162 40 93 WP_047383608.1 MULTISPECIES: desulfoferrodoxin family protein [unclassified Cetobacterium] diamond 162 115 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
31633435 31633435 PRJNA771359_S_NODE_3056_length_192_cov_1.961290_g2973_i0 PRJNA771359 3056 192 1.96129 3.7656768 uncultured Cetobacterium sp. 527638 Bacteria Bacteria 92.4 4.26e-23   NR WP_294097107.1 527638 g2973 i0 85.5 0.859375 55 8 85.9 0 7 171 1 55 WP_294097107.1 hypothetical protein [uncultured Cetobacterium sp.] diamond 165 92.4 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium uncultured Cetobacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;