contig_metadata
10 rows where analysis = "diamond", bioproject = "PRJNA771359" and tax_phylum = "Ciliophora"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27053363 | 27053363 | PRJNA771359_S_NODE_1642_length_264_cov_1.894273_g1559_i0 | PRJNA771359 | 1642 | 264 | 1.894273 | 5.00088072 | Tetrahymena thermophila SB21 | 5911 | SAR_Eukaryotes | SAR_Eukaryotes | 64.3 | 3.1e-11 | NR | XP_012651983.1 | 312017 | g1559 | i0 | 50.7 | 0.806818181818182 | 71 | 35 | 80.7 | 0 | 6 | 218 | 15 | 85 | XP_012651983.1 hypothetical protein TTHERM_000784569 [Tetrahymena thermophila SB210] | diamond | 213 | 64.3 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena thermophila | ||
| 27189140 | 27189140 | PRJNA771359_S_NODE_3782_length_173_cov_1.419118_g3699_i0 | PRJNA771359 | 3782 | 173 | 1.419118 | 2.45507414 | Tetrahymenidae | 291294 | SAR_Eukaryotes | SAR_Eukaryotes | 45.1 | 0.00221 | NR | NP_049598.1 | 5908 | g3699 | i0 | 81.8 | 0.763005780346821 | 22 | 4 | 38.2 | 0 | 172 | 107 | 185 | 206 | NP_049598.1 apocytochrome b [Tetrahymena pyriformis] | diamond | 132 | 45.4 | 0.993392070484582 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena pyriformis | ||
| 27685426 | 27685426 | PRJNA771359_S_NODE_2384_length_217_cov_1.577778_g2301_i0 | PRJNA771359 | 2384 | 217 | 1.577778 | 3.42377826 | Paramecium pentaurelia | 43138 | SAR_Eukaryotes | SAR_Eukaryotes | 68.6 | 2.59e-12 | NR | CAD8155930.1 | 43138 | g2301 | i0 | 55.4 | 0.898617511520737 | 65 | 28 | 89.9 | 1 | 215 | 21 | 16 | 79 | CAD8155930.1 unnamed protein product [Paramecium pentaurelia] | diamond | 195 | 68.6 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Peniculida | Parameciidae | Paramecium | Paramecium pentaurelia | ||
| 28158966 | 28158966 | PRJNA771359_S_NODE_4145_length_166_cov_1.744186_g4062_i0 | PRJNA771359 | 4145 | 166 | 1.744186 | 2.89534876 | Blepharisma stoltei | 1481888 | SAR_Eukaryotes | SAR_Eukaryotes | 93.6 | 2.62e-22 | NR | CAG9318382.1 | 1481888 | g4062 | i0 | 75.9 | 0.975903614457831 | 54 | 13 | 97.6 | 0 | 162 | 1 | 52 | 105 | CAG9318382.1 unnamed protein product [Blepharisma stoltei] | diamond | 162 | 93.6 | 1 | Eukaryota | Sar | Ciliophora | Heterotrichea | Heterotrichida | Blepharismidae | Blepharisma | Blepharisma stoltei | ||
| 28853151 | 28853151 | PRJNA771359_S_NODE_2668_length_205_cov_1.428571_g2585_i0 | PRJNA771359 | 2668 | 205 | 1.428571 | 2.92857055 | Paramecium sonneborni | 65129 | SAR_Eukaryotes | SAR_Eukaryotes | 65.9 | 1.21e-10 | NR | CAD8069000.1 | 65129 | g2585 | i0 | 61.9 | 2.75121951219512 | 63 | 24 | 92.2 | 0 | 204 | 16 | 250 | 312 | CAD8069000.1 unnamed protein product [Paramecium sonneborni] | diamond | 564 | 65.9 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Peniculida | Parameciidae | Paramecium | Paramecium sonneborni | ||
| 28979834 | 28979834 | PRJNA771359_S_NODE_4268_length_164_cov_1.204724_g4185_i0 | PRJNA771359 | 4268 | 164 | 1.204724 | 1.97574736 | Paramecium octaurelia | 43137 | SAR_Eukaryotes | SAR_Eukaryotes | 45.4 | 0.00145 | NR | CAD8135162.1 | 43137 | g4185 | i0 | 38.5 | 0.951219512195122 | 52 | 30 | 95.1 | 1 | 2 | 157 | 736 | 785 | CAD8135162.1 unnamed protein product [Paramecium octaurelia] | diamond | 156 | 45.4 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Peniculida | Parameciidae | Paramecium | Paramecium octaurelia | ||
| 29074573 | 29074573 | PRJNA771359_S_NODE_3228_length_187_cov_1.033333_g3145_i0 | PRJNA771359 | 3228 | 187 | 1.033333 | 1.93233271 | Thuricola similis | 2784598 | SAR_Eukaryotes | SAR_Eukaryotes | 78.2 | 5.5e-15 | NR | YP_010147331.1 | 2784598 | g3145 | i0 | 83.3 | 0.770053475935829 | 48 | 8 | 77 | 0 | 3 | 146 | 335 | 382 | YP_010147331.1 cytochrome c oxidase subunit 1 [Thuricola similis] | diamond | 144 | 78.2 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Sessilida | Vaginicolidae | Thuricola | Thuricola similis | ||
| 29494405 | 29494405 | PRJNA771359_S_NODE_3450_length_181_cov_1.340278_g3367_i0 | PRJNA771359 | 3450 | 181 | 1.340278 | 2.42590318 | Tetrahymena | 5890 | SAR_Eukaryotes | SAR_Eukaryotes | 40.8 | 0.0283 | NR | XP_012652362.1 | 312017 | g3367 | i0 | 56.8 | 1.83977900552486 | 37 | 16 | 61.3 | 0 | 137 | 27 | 17 | 53 | XP_012652362.1 hypothetical protein TTHERM_000294739 [Tetrahymena thermophila SB210] | diamond | 333 | 40.8 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena thermophila | ||
| 29999817 | 29999817 | PRJNA771359_S_NODE_4271_length_164_cov_1.181102_g4188_i0 | PRJNA771359 | 4271 | 164 | 1.181102 | 1.93700728 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 59.7 | 1.16e-8 | NR | CAD8084070.1 | 65129 | g4188 | i0 | 52.9 | 15.1646341463415 | 51 | 24 | 93.3 | 0 | 164 | 12 | 206 | 256 | CAD8084070.1 unnamed protein product [Paramecium sonneborni] | diamond | 2487 | 60.1 | 0.993344425956739 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Peniculida | Parameciidae | Paramecium | Paramecium sonneborni | ||
| 30401312 | 30401312 | PRJNA771359_S_NODE_3453_length_181_cov_1.340278_g3370_i0 | PRJNA771359 | 3453 | 181 | 1.340278 | 2.42590318 | Paramecium primaurelia | 5886 | SAR_Eukaryotes | SAR_Eukaryotes | 71.6 | 1.06e-12 | NR | CAD8044685.1 | 5886 | g3370 | i0 | 61.8 | 1.8232044198895 | 55 | 21 | 91.2 | 0 | 180 | 16 | 214 | 268 | CAD8044685.1 unnamed protein product, partial [Paramecium primaurelia] | diamond | 330 | 71.6 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Peniculida | Parameciidae | Paramecium | Paramecium primaurelia |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;