RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA770826" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA770826 · 6 ✖

analysis 1

  • diamond · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6310763 6310763 PRJNA770826_P_NODE_5845_length_348_cov_1.217391_g5674_i0 PRJNA770826 5845 348 1.217391 4.23652068 Bacteria 2 Bacteria Bacteria 135 2.73e-34   NR MBN1493660.1 2035772 g5674 i0 58.9 3.82758620689655 112 45 96.6 1 338 3 652 762 MBN1493660.1 pyruvate, phosphate dikinase [Candidatus Omnitrophota bacterium] diamond 1332 135 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
24973555 24973555 PRJNA770826_P_NODE_37740_length_164_cov_0.904348_g37569_i0 PRJNA770826 37740 164 0.904348 1.48313072 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 104 2.32e-24   NR MCX5712880.1 2035772 g37569 i0 87 5.92682926829268 54 7 98.8 0 1 162 282 335 MCX5712880.1 glucose-6-phosphate isomerase [Candidatus Omnitrophota bacterium] diamond 972 104 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
26831815 26831815 PRJNA770826_P_NODE_19221_length_185_cov_1.147059_g19050_i0 PRJNA770826 19221 185 1.147059 2.12205915 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 61.2 1.26e-10   NR MEA3305771.1 2035772 g19050 i0 67.4 2.27027027027027 46 15 74.6 0 183 46 16 61 MEA3305771.1 RNA-binding protein [Candidatus Omnitrophota bacterium] diamond 420 61.2 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28095575 28095575 PRJNA770826_P_NODE_33505_length_165_cov_1.387931_g33334_i0 PRJNA770826 33505 165 1.387931 2.29008615 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 73.9 1.27e-13   NR MBU1913507.1 2035772 g33334 i0 63 0.981818181818182 54 20 98.2 0 3 164 1664 1717 MBU1913507.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 162 73.9 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29137756 29137756 PRJNA770826_P_NODE_12229_length_230_cov_1.149171_g12058_i0 PRJNA770826 12229 230 1.149171 2.6430933 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 62.4 3.82e-9   NR NQU74025.1 2035772 g12058 i0 44.4 1.59130434782609 63 35 82.2 0 4 192 972 1034 NQU74025.1 methyltransferase domain-containing protein [Candidatus Omnitrophota bacterium] diamond 366 62.4 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30653407 30653407 PRJNA770826_P_NODE_18353_length_189_cov_1.114286_g18182_i0 PRJNA770826 18353 189 1.114286 2.10600054 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 51.2 1.86e-5   NR MCB9719623.1 2035772 g18182 i0 43.1 2.06349206349206 65 29 90.5 2 188 18 3435 3499 MCB9719623.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 390 51.2 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;