RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA770826" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA770826 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28127234 28127234 PRJNA770826_P_NODE_1565_length_682_cov_1.442338_g1418_i0 PRJNA770826 1565 682 1.442338 9.83674516 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 52 5.27e-4   NR HEY9814218.1 2364082 g1418 i0 29.9 0.589442815249267 134 90 58.9 3 409 8 44 173 HEY9814218.1 hypothetical protein [Candidatus Obscuribacterales bacterium] diamond 402 52 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
29169233 29169233 PRJNA770826_P_NODE_36269_length_164_cov_1.347826_g36098_i0 PRJNA770826 36269 164 1.347826 2.21043464 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 88.2 1.22e-18   NR MBK9141347.1 2052166 g36098 i0 79.2 2.90853658536585 53 11 97 0 6 164 44 96 MBK9141347.1 phosphoenolpyruvate carboxykinase (GTP) [Candidatus Melainabacteria bacterium] diamond 477 88.2 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
30379173 30379173 PRJNA770826_P_NODE_8372_length_281_cov_1.133621_g8201_i0 PRJNA770826 8372 281 1.133621 3.18547501 Bacteria 2 Bacteria Bacteria 121 6.07e-32   NR HNB23518.1 2052166 g8201 i0 61.3 2.97864768683274 93 36 99.3 0 280 2 53 145 HNB23518.1 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme [Candidatus Melainabacteria bacterium] diamond 837 121 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
32013127 32013127 PRJNA770826_P_NODE_28978_length_167_cov_0.881356_g28807_i0 PRJNA770826 28978 167 0.881356 1.47186452 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 45.8 6.94e-4   NR MBI4534601.1 2052166 g28807 i0 51.9 0.934131736526946 52 19 93.4 1 1 156 125 170 MBI4534601.1 cell filamentation protein Fic [Candidatus Melainabacteria bacterium] diamond 156 45.8 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;