RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA770826" and tax_phylum = "Candidatus Macinerneyibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Macinerneyibacteriota · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA770826 · 1 ✖

analysis 1

  • diamond · 1 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31823134 31823134 PRJNA770826_P_NODE_24777_length_169_cov_0.866667_g24606_i0 PRJNA770826 24777 169 0.866667 1.46466723 Candidatus Mcinerneyibacterium aminivorans 2703815 Bacteria Bacteria 61.6 1.31e-9   NR TYB31191.1 2703815 g24606 i0 68.4 1.3491124260355 38 12 67.5 0 16 129 171 208 TYB31191.1 MAG: fumarylacetoacetate hydrolase family protein [Candidatus Mcinerneyibacterium aminivorans] diamond 228 61.6 1 Bacteria Bacteria candidate phyla   Candidatus Macinerneyibacteriota Candidatus Mcinerneyibacteria Candidatus Mcinerneyibacteriales Candidatus Mcinerneyibacteriaceae Candidatus Mcinerneyibacterium Candidatus Mcinerneyibacterium aminivorans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;