RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA770361" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJNA770361 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29390210 29390210 PRJNA770361_P_NODE_3789_length_484_cov_1.897810_g3694_i0 PRJNA770361 3789 484 1.89781 9.1854004 Colletotrichum camelliae hypovirus 1 3071075 Viruses Viruses 84.3 1.67e-15   NR WMI30737.1 3071075 g3694 i0 62.7 0.365702479338843 59 22 36.6 0 482 306 2824 2882 WMI30737.1 RNA-dependent RNA polymerase [Colletotrichum camelliae hypovirus 1] diamond 177 84.3 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Hypoviridae   Colletotrichum camelliae hypovirus 1
30716627 30716627 PRJNA770361_P_NODE_17654_length_245_cov_0.906977_g17559_i0 PRJNA770361 17654 245 0.906977 2.22209365 Durnavirales sp. 2809355 Viruses Viruses 52 2.05e-5   NR WRQ64726.1 2809355 g17559 i0 34.2 0.96734693877551 79 50 96.7 1 245 9 169 245 WRQ64726.1 RNA-dependent RNA polymerase, partial [Durnavirales sp.] diamond 237 52 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales     Durnavirales sp.
32802885 32802885 PRJNA770361_P_NODE_580_length_1178_cov_1.550226_g531_i0 PRJNA770361 580 1178 1.550226 18.26166228 Narnavirus sp. 2587225 Viruses Viruses 65.1 1.47e-8   NR CAK8705411.1 2587225 g531 i0 34.4 1.16638370118846 128 73 32.1 3 1085 708 4 122 CAK8705411.1 uncharacterized [Narnavirus sp.] diamond 1374 65.1 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Narnavirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;