RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA768450" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA768450 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27527153 27527153 PRJNA768450_S_NODE_15503_length_187_cov_2.217391_g15454_i0 PRJNA768450 15503 187 2.217391 4.14652117 Glyptapanteles flavicoxis 463051 Arthropoda Arthropoda 99.4 2e-22   NR ACE75273.1 463051 g15454 i0 73.8 1.9572192513369 61 16 97.9 0 185 3 1268 1328 ACE75273.1 retroelement polyprotein [Glyptapanteles flavicoxis] diamond 366 99.4 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Hymenoptera Braconidae Glyptapanteles Glyptapanteles flavicoxis
30716620 30716620 PRJNA768450_S_NODE_14774_length_191_cov_1.077465_g14725_i0 PRJNA768450 14774 191 1.077465 2.05795815 Lasius niger 67767 Arthropoda Arthropoda 109 3.79e-28   NR KMQ82027.1 67767 g14725 i0 100 0.848167539267016 54 0 84.8 0 163 2 141 194 KMQ82027.1 retroelement polyprotein, partial [Lasius niger] diamond 162 109 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Hymenoptera Formicidae Lasius Lasius niger

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;