RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA767802" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA767802 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29263549 29263549 PRJNA767802_P_NODE_14129_length_181_cov_1.848485_g14056_i0 PRJNA767802 14129 181 1.848485 3.34575785 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 94 3.71e-23   NR PAA69855.1 282301 g14056 i0 72.4 1.93922651933702 58 16 96.1 0 4 177 51 108 PAA69855.1 hypothetical protein BOX15_Mlig028979g1 [Macrostomum lignano] diamond 351 94 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
30558539 30558539 PRJNA767802_P_NODE_7673_length_273_cov_2.049107_g7600_i0 PRJNA767802 7673 273 2.049107 5.59406211 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 122 8.81e-34   NR AAY97887.1 6182 g7600 i0 77.6 0.835164835164835 76 17 83.5 0 2 229 52 127 AAY97887.1 unknown [Schistosoma japonicum] diamond 228 122 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
30685009 30685009 PRJNA767802_P_NODE_3053_length_511_cov_3.272727_g2982_i0 PRJNA767802 3053 511 3.272727 16.72363497 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 65.9 4.73e-9   NR PAA93605.1 282301 g2982 i0 25.8 0.727984344422701 124 91 72.8 1 101 472 322 444 PAA93605.1 hypothetical protein BOX15_Mlig031413g1 [Macrostomum lignano] diamond 372 65.9 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;