RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA767802" and tax_phylum = "Bacillota"

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tax_superkingdom 1

tax_phylum 1

  • Bacillota · 9 ✖

tax_kingdom 1

bioproject 1

  • PRJNA767802 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22422506 22422506 PRJNA767802_P_NODE_538_length_1199_cov_6.956522_g509_i0 PRJNA767802 538 1199 6.956522 83.40869878 Aeribacillus 1055323 Bacteria Bacteria 629 4.499999999999998e-216   NR WP_327874011.1 1868734 g509 i0 79.1 4.84153461217681 387 81 96.8 0 18 1178 224 610 WP_327874011.1 formate dehydrogenase subunit alpha [Aeribacillus composti] diamond 5805 629 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Aeribacillus Aeribacillus composti
27622042 27622042 PRJNA767802_P_NODE_2504_length_570_cov_3.397313_g2437_i0 PRJNA767802 2504 570 3.397313 19.3646841 Paenibacillus sp. HB172176 2493690 Bacteria Bacteria 59.3 1.08e-6   NR WP_240941536.1 2493690 g2437 i0 44.3 0.626315789473684 61 34 32.1 0 382 564 12 72 WP_240941536.1 hypothetical protein [Paenibacillus sp. HB172176] diamond 357 59.3 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Paenibacillus Paenibacillus sp. HB172176
28158896 28158896 PRJNA767802_P_NODE_3065_length_510_cov_10.312364_g2994_i0 PRJNA767802 3065 510 10.312364 52.5930564 Aerococcus sp. 1KP-2 1872398 Bacteria Bacteria 291 4.6200000000000004e-91   NR WP_094518467.1 1981982 g2994 i0 100 0.929411764705882 158 0 92.9 0 18 491 239 396 WP_094518467.1 ATP-binding cassette domain-containing protein [Aerococcus sp. 1KP-2016] diamond 474 291 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Aerococcaceae Aerococcus Aerococcus sp. 1KP-2016
28379658 28379658 PRJNA767802_P_NODE_10546_length_219_cov_1.500000_g10473_i0 PRJNA767802 10546 219 1.5 3.285 Fictibacillus aquaticus 2021314 Bacteria Bacteria 91.7 1.5e-19   NR WP_094250820.1 2021314 g10473 i0 59.7 2.94520547945205 72 29 98.6 0 217 2 33 104 WP_094250820.1 flagellar basal-body MS-ring/collar protein FliF [Fictibacillus aquaticus] diamond 645 91.7 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Fictibacillaceae Fictibacillus Fictibacillus aquaticus
29990064 29990064 PRJNA767802_P_NODE_14111_length_181_cov_2.348485_g14038_i0 PRJNA767802 14111 181 2.348485 4.25075785 Staphylococcus aureus 1280 Bacteria Bacteria 43.9 0.00133   NR MCS4580470.1 1280 g14038 i0 91.9 0.613259668508287 37 3 61.3 0 178 68 1 37 MCS4580470.1 hypothetical protein [Staphylococcus aureus] diamond 111 43.9 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Staphylococcaceae Staphylococcus Staphylococcus aureus
30653361 30653361 PRJNA767802_P_NODE_15053_length_173_cov_2.467742_g14980_i0 PRJNA767802 15053 173 2.467742 4.26919366 Lucifera butyrica 1351585 Bacteria Bacteria 79.3 1.31e-16   NR WP_122626647.1 1351585 g14980 i0 58.9 3.9364161849711 56 23 97.1 0 173 6 80 135 WP_122626647.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD [Lucifera butyrica] diamond 681 79.3 1 Bacteria   Bacillati Bacillota Negativicutes Veillonellales Veillonellaceae Lucifera Lucifera butyrica
31548404 31548404 PRJNA767802_P_NODE_3376_length_481_cov_10.043981_g3304_i0 PRJNA767802 3376 481 10.043981 48.31154861 root 1 Root_unresolved Root_unresolved 125 1.78e-32   NR MCK9471944.1 1903720 g3304 i0 59.8 3.54261954261954 97 39 60.5 0 481 191 120 216 MCK9471944.1 hypothetical protein [Bacilli bacterium] diamond 1704 126 0.992063492063492 Bacteria   Bacillati Bacillota Bacilli       Bacilli bacterium
32202944 32202944 PRJNA767802_P_NODE_13438_length_188_cov_0.928058_g13365_i0 PRJNA767802 13438 188 0.928058 1.74474904 Lacticaseibacillus paracasei 1597 Bacteria Bacteria 117 1.19e-32   NR MFK5282332.1 1597 g13365 i0 98.2 0.877659574468085 55 1 87.8 0 22 186 1 55 MFK5282332.1 hypothetical protein [Lacticaseibacillus paracasei] diamond 165 117 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Lacticaseibacillus Lacticaseibacillus paracasei
32676778 32676778 PRJNA767802_P_NODE_17880_length_163_cov_0.894737_g17807_i0 PRJNA767802 17880 163 0.894737 1.45842131 Erysipelotrichaceae bacterium 2049044 Bacteria Bacteria 53.9 1.43e-6   NR MBQ1341607.1 2049044 g17807 i0 60.4 0.883435582822086 48 18 88.3 1 16 159 1 47 MBQ1341607.1 DUF2213 domain-containing protein [Erysipelotrichaceae bacterium] diamond 144 53.9 1 Bacteria   Bacillati Bacillota Erysipelotrichia Erysipelotrichales Erysipelotrichaceae   Erysipelotrichaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;