RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA766854" and tax_phylum = "Uroviricota"

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tax_superkingdom 1

tax_phylum 1

  • Uroviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA766854 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29800404 29800404 PRJNA766854_P_NODE_1791_length_312_cov_1.780919_g1666_i0 PRJNA766854 1791 312 1.780919 5.55646728 Microbacterium phage Shocker 2805839 Viruses Viruses 43.9 0.0319   NR YP_010755454.1 2805839 g1666 i0 90 0.192307692307692 20 2 19.2 0 125 66 118 137 YP_010755454.1 DNA primase/helicase [Microbacterium phage Shocker] diamond 60 43.9 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Shockervirus Shockervirus shocker
32897212 32897212 PRJNA766854_P_NODE_1520_length_336_cov_3.276873_g1395_i0 PRJNA766854 1520 336 3.276873 11.01029328 Microbacterium phage Shocker 2805839 Viruses Viruses 47.4 3.6e-4   NR YP_010755426.1 2805839 g1395 i0 84 0.223214285714286 25 4 22.3 0 79 5 45 69 YP_010755426.1 hypothetical protein QEH45_gp16 [Microbacterium phage Shocker] diamond 75 47.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Shockervirus Shockervirus shocker

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;