RNAquarium Metadata Server
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contig_metadata

32 rows where analysis = "diamond", bioproject = "PRJNA766854" and tax_phylum = "Bacillota"

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tax_superkingdom 1

tax_phylum 1

  • Bacillota · 32 ✖

tax_kingdom 1

bioproject 1

  • PRJNA766854 · 32 ✖

analysis 1

  • diamond · 32 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9673406 9673406 PRJNA766854_P_NODE_1468_length_342_cov_4.373802_g1343_i0 PRJNA766854 1468 342 4.373802 14.95840284 Bacillota 1239 Bacteria Bacteria 81.3 2.89e-17   NR WP_005585228.1 94009 g1343 i0 87.8 0.719298245614035 41 5 36 0 340 218 66 106 WP_005585228.1 IS66 family transposase zinc-finger binding domain-containing protein [Thermicanus aegyptius] diamond 246 81.6 0.996323529411765 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillales Family X. Incertae Sedis Thermicanus Thermicanus aegyptius
14773876 14773876 PRJNA766854_P_NODE_2672_length_266_cov_3.649789_g2546_i0 PRJNA766854 2672 266 3.649789 9.70843874 Thermicanus aegyptius 94009 Bacteria Bacteria 67 1.38e-10   NR WP_039944592.1 94009 g2546 i0 100 1.04887218045113 31 0 35 0 96 4 233 263 WP_039944592.1 IS66 family transposase [Thermicanus aegyptius] diamond 279 67 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillales Family X. Incertae Sedis Thermicanus Thermicanus aegyptius
18596663 18596663 PRJNA766854_P_NODE_2235_length_286_cov_3.214008_g2109_i0 PRJNA766854 2235 286 3.214008 9.19206288 Thermicanus aegyptius 94009 Bacteria Bacteria 67 1.8e-10   NR WP_039944592.1 94009 g2109 i0 100 0.975524475524476 31 0 32.5 0 96 4 233 263 WP_039944592.1 IS66 family transposase [Thermicanus aegyptius] diamond 279 67 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillales Family X. Incertae Sedis Thermicanus Thermicanus aegyptius
26651050 26651050 PRJNA766854_P_NODE_761_length_461_cov_1.032407_g652_i0 PRJNA766854 761 461 1.032407 4.75939627 Bacillota 1239 Bacteria Bacteria 47 0.0106   NR WP_039944701.1 94009 g652 i0 79.2 0.650759219088937 24 5 15.6 0 266 195 381 404 WP_039944701.1 alpha-amylase family glycosyl hydrolase [Thermicanus aegyptius] diamond 300 47 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillales Family X. Incertae Sedis Thermicanus Thermicanus aegyptius
26831757 26831757 PRJNA766854_P_NODE_2021_length_300_cov_2.261993_g1896_i0 PRJNA766854 2021 300 2.261993 6.785979 Thermicanus aegyptius 94009 Bacteria Bacteria 64.3 4.19e-10   NR WP_028988496.1 94009 g1896 i0 86.7 0.3 30 4 30 0 210 299 100 129 WP_028988496.1 anthranilate synthase component II [Thermicanus aegyptius] diamond 90 64.3 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillales Family X. Incertae Sedis Thermicanus Thermicanus aegyptius
27369601 27369601 PRJNA766854_P_NODE_2003_length_301_cov_1.852941_g1878_i0 PRJNA766854 2003 301 1.852941 5.57735241 Thermicanus aegyptius 94009 Bacteria Bacteria 43.9 0.0269   NR WP_028988207.1 94009 g1878 i0 79.2 0.239202657807309 24 5 23.9 0 51 122 297 320 WP_028988207.1 RNA-guided endonuclease InsQ/TnpB family protein [Thermicanus aegyptius] diamond 72 43.9 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillales Family X. Incertae Sedis Thermicanus Thermicanus aegyptius
27527143 27527143 PRJNA766854_P_NODE_16583_length_244_cov_1.637209_g16457_i0 PRJNA766854 16583 244 1.637209 3.99478996 Thermicanus aegyptius 94009 Bacteria Bacteria 48.9 2.28e-4   NR WP_039944352.1 94009 g16457 i0 73.3 0.368852459016393 30 8 36.9 0 237 148 134 163 WP_039944352.1 3-keto-5-aminohexanoate cleavage protein [Thermicanus aegyptius] diamond 90 48.9 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillales Family X. Incertae Sedis Thermicanus Thermicanus aegyptius
27590525 27590525 PRJNA766854_P_NODE_2264_length_285_cov_2.382812_g2138_i0 PRJNA766854 2264 285 2.382812 6.7910142 Paenibacillus macerans 44252 Bacteria Bacteria 51.6 4.7e-5   NR WP_251596799.1 44252 g2138 i0 70.3 0.38947368421052603 37 11 38.9 0 111 1 230 266 WP_251596799.1 hypothetical protein [Paenibacillus macerans] diamond 111 51.6 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Paenibacillus Paenibacillus macerans
27685349 27685349 PRJNA766854_P_NODE_944_length_429_cov_10.617500_g830_i0 PRJNA766854 944 429 10.6175 45.549075 Thermicanus aegyptius 94009 Bacteria Bacteria 171 1.43e-51   NR WP_052329760.1 94009 g830 i0 93 0.699300699300699 100 7 69.9 0 128 427 71 170 WP_052329760.1 PepSY domain-containing protein [Thermicanus aegyptius] diamond 300 171 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillales Family X. Incertae Sedis Thermicanus Thermicanus aegyptius
27969177 27969177 PRJNA766854_P_NODE_1025_length_417_cov_1.229381_g908_i0 PRJNA766854 1025 417 1.229381 5.12651877 Thermicanus aegyptius 94009 Bacteria Bacteria 57 1.74e-6   NR WP_028986332.1 94009 g908 i0 43.2 0.58273381294964 81 35 58.3 1 173 415 125 194 WP_028986332.1 carbohydrate ABC transporter permease [Thermicanus aegyptius] diamond 243 57 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillales Family X. Incertae Sedis Thermicanus Thermicanus aegyptius
28063869 28063869 PRJNA766854_P_NODE_525_length_526_cov_1.796781_g438_i0 PRJNA766854 525 526 1.796781 9.45106806 Thermicanus aegyptius 94009 Bacteria Bacteria 58.2 2.51e-6   NR WP_156920547.1 94009 g438 i0 100 0.182509505703422 32 0 18.3 0 159 64 292 323 WP_156920547.1 HAMP domain-containing sensor histidine kinase [Thermicanus aegyptius] diamond 96 58.2 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillales Family X. Incertae Sedis Thermicanus Thermicanus aegyptius
28379648 28379648 PRJNA766854_P_NODE_1726_length_316_cov_3.958188_g1601_i0 PRJNA766854 1726 316 3.958188 12.50787408 Lactobacillus crispatus 47770 Bacteria Bacteria 79 1.69e-16   NR WP_205758365.1 47770 g1601 i0 67.3 0.987341772151899 104 28 97.8 2 311 3 6 104 WP_205758365.1 hypothetical protein, partial [Lactobacillus crispatus] diamond 312 79 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Lactobacillus Lactobacillus crispatus
28484066 28484066 PRJNA766854_P_NODE_1806_length_311_cov_2.301418_g1681_i0 PRJNA766854 1806 311 2.301418 7.15740998 Bacillales 1385 Bacteria Bacteria 94 1.77e-20   NR WP_121444385.1 933949 g1681 i0 91.8 2.36334405144695 49 4 47.3 0 310 164 172 220 WP_121444385.1 ABC transporter ATP-binding protein [Brockia lithotrophica] diamond 735 94 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillales Family X. Incertae Sedis Brockia Brockia lithotrophica
28547382 28547382 PRJNA766854_P_NODE_647_length_489_cov_1.278261_g543_i0 PRJNA766854 647 489 1.278261 6.25069629 Bacilli 91061 Bacteria Bacteria 48.1 0.00124   NR HER2178012.1 1314 g543 i0 95.5 15.3865030674847 22 1 13.5 0 245 180 71 92 HER2178012.1 radical SAM protein [Streptococcus pyogenes] diamond 7524 48.5 0.991752577319588 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus pyogenes
28736609 28736609 PRJNA766854_P_NODE_1087_length_405_cov_2.260638_g966_i0 PRJNA766854 1087 405 2.260638 9.1555839 Thermicanus 94008 Bacteria Bacteria 55.1 9.68e-6   NR WP_156920736.1 94009 g966 i0 42 1.2 81 29 60 1 162 404 141 203 WP_156920736.1 Nramp family divalent metal transporter [Thermicanus aegyptius] diamond 486 55.1 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillales Family X. Incertae Sedis Thermicanus Thermicanus aegyptius
28768088 28768088 PRJNA766854_P_NODE_2607_length_268_cov_7.828452_g2481_i0 PRJNA766854 2607 268 7.828452 20.98025136 Paenibacillus 44249 Bacteria Bacteria 42.7 0.017   NR MBG9732894.1 44250 g2481 i0 58.3 0.828358208955224 36 15 40.3 0 43 150 77 112 MBG9732894.1 hypothetical protein [Paenibacillus alvei] diamond 222 42.7 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Paenibacillus Paenibacillus alvei
29011503 29011503 PRJNA766854_P_NODE_188_length_722_cov_2.197691_g147_i0 PRJNA766854 188 722 2.197691 15.86732902 Carnobacterium divergens 2748 Bacteria Bacteria 49.3 0.00278   NR WP_074403237.1 2748 g147 i0 52.3 0.182825484764543 44 21 18.3 0 209 340 30 73 WP_074403237.1 Maf family protein [Carnobacterium divergens] diamond 132 49.3 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Carnobacteriaceae Carnobacterium Carnobacterium divergens
29084017 29084017 PRJNA766854_P_NODE_2228_length_287_cov_1.810078_g2102_i0 PRJNA766854 2228 287 1.810078 5.19492386 Bacillales 1385 Bacteria Bacteria 57.8 3.7e-8   NR WP_258420899.1 1465 g2102 i0 89.7 1.21254355400697 29 3 30.3 0 88 2 12 40 WP_258420899.1 sigma factor-like helix-turn-helix DNA-binding protein, partial [Brevibacillus laterosporus] diamond 348 57.8 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Brevibacillus Brevibacillus laterosporus
29137706 29137706 PRJNA766854_P_NODE_789_length_455_cov_2.063380_g679_i0 PRJNA766854 789 455 2.06338 9.388379 Thermicanus aegyptius 94009 Bacteria Bacteria 55.5 7.56e-6   NR WP_005588022.1 94009 g679 i0 100 0.17142857142857101 26 0 17.1 0 192 269 149 174 WP_005588022.1 lantibiotic immunity ABC transporter MutE/EpiE family permease subunit [Thermicanus aegyptius] diamond 78 55.5 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillales Family X. Incertae Sedis Thermicanus Thermicanus aegyptius
29263546 29263546 PRJNA766854_P_NODE_1649_length_323_cov_2.295918_g1524_i0 PRJNA766854 1649 323 2.295918 7.41581514 Candidatus Carbobacillus altaicus 2163959 Bacteria Bacteria 48.1 0.00101   NR PTQ55739.1 2163959 g1524 i0 100 0.195046439628483 21 0 19.5 0 65 3 68 88 PTQ55739.1 MAG: Mobile element protein [Candidatus Carbobacillus altaicus] diamond 63 48.1 1 Bacteria   Bacillati Bacillota Bacilli Bacillales   Candidatus Carbonibacillus Candidatus Carbonibacillus altaicus
29452871 29452871 PRJNA766854_P_NODE_3250_length_256_cov_3.193833_g3124_i0 PRJNA766854 3250 256 3.193833 8.17621248 Candidatus Carbobacillus altaicus 2163959 Bacteria Bacteria 67.8 4.84e-11   NR PTQ56874.1 2163959 g3124 i0 97 0.38671875 33 1 38.7 0 99 1 99 131 PTQ56874.1 MAG: hypothetical protein BSOLF_2550 [Candidatus Carbobacillus altaicus] diamond 99 67.8 1 Bacteria   Bacillati Bacillota Bacilli Bacillales   Candidatus Carbonibacillus Candidatus Carbonibacillus altaicus
29516155 29516155 PRJNA766854_P_NODE_1250_length_372_cov_2.317784_g1125_i0 PRJNA766854 1250 372 2.317784 8.62215648 Enterococcus faecium 1352 Bacteria Bacteria 131 6.93e-37   NR WP_161973289.1 1352 g1125 i0 98.5 0.524193548387097 65 1 52.4 0 370 176 37 101 WP_161973289.1 hypothetical protein, partial [Enterococcus faecium] diamond 195 131 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Enterococcaceae Enterococcus Enterococcus faecium
29610745 29610745 PRJNA766854_P_NODE_2710_length_265_cov_3.516949_g2584_i0 PRJNA766854 2710 265 3.516949 9.31991485 Candidatus Carbobacillus altaicus 2163959 Bacteria Bacteria 67.8 5.41e-11   NR PTQ56874.1 2163959 g2584 i0 97 0.373584905660377 33 1 37.4 0 167 265 99 131 PTQ56874.1 MAG: hypothetical protein BSOLF_2550 [Candidatus Carbobacillus altaicus] diamond 99 67.8 1 Bacteria   Bacillati Bacillota Bacilli Bacillales   Candidatus Carbonibacillus Candidatus Carbonibacillus altaicus
29895353 29895353 PRJNA766854_P_NODE_2091_length_295_cov_2.556391_g1965_i0 PRJNA766854 2091 295 2.556391 7.54135345 Candidatus Carbobacillus altaicus 2163959 Bacteria Bacteria 67.8 7.8e-11   NR PTQ56874.1 2163959 g1965 i0 97 0.335593220338983 33 1 33.6 0 197 295 99 131 PTQ56874.1 MAG: hypothetical protein BSOLF_2550 [Candidatus Carbobacillus altaicus] diamond 99 67.8 1 Bacteria   Bacillati Bacillota Bacilli Bacillales   Candidatus Carbonibacillus Candidatus Carbonibacillus altaicus
29958401 29958401 PRJNA766854_P_NODE_3171_length_257_cov_3.008772_g3045_i0 PRJNA766854 3171 257 3.008772 7.73254404 Candidatus Carbobacillus altaicus 2163959 Bacteria Bacteria 67.8 4.84e-11   NR PTQ56874.1 2163959 g3045 i0 97 0.385214007782101 33 1 38.5 0 99 1 99 131 PTQ56874.1 MAG: hypothetical protein BSOLF_2550 [Candidatus Carbobacillus altaicus] diamond 99 67.8 1 Bacteria   Bacillati Bacillota Bacilli Bacillales   Candidatus Carbonibacillus Candidatus Carbonibacillus altaicus
30094267 30094267 PRJNA766854_P_NODE_1712_length_318_cov_2.200692_g1587_i0 PRJNA766854 1712 318 2.200692 6.99820056 Bacillales Family X. Incertae Sedis 539003 Bacteria Bacteria 45.4 0.00933   NR WP_005585707.1 94009 g1587 i0 50 1.31132075471698 46 15 35.8 1 4 117 54 99 WP_005585707.1 histidine kinase [Thermicanus aegyptius] diamond 417 45.8 0.991266375545852 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillales Family X. Incertae Sedis Thermicanus Thermicanus aegyptius
30242904 30242904 PRJNA766854_P_NODE_2092_length_295_cov_2.221805_g1966_i0 PRJNA766854 2092 295 2.221805 6.55432475 Candidatus Carbonibacillus altaicus 2163959 Bacteria Bacteria 52.4 1.94e-5   NR MBE3594846.1 2163959 g1966 i0 80.6 0.945762711864407 31 6 31.5 0 291 199 114 144 MBE3594846.1 UPF0236 family protein [Candidatus Carbobacillus altaicus] diamond 279 52.4 1 Bacteria   Bacillati Bacillota Bacilli Bacillales   Candidatus Carbonibacillus Candidatus Carbonibacillus altaicus
31032949 31032949 PRJNA766854_P_NODE_18835_length_158_cov_2.984496_g18708_i0 PRJNA766854 18835 158 2.984496 4.71550368 Thermicanus aegyptius 94009 Bacteria Bacteria 72.8 2.32e-13   NR WP_005583539.1 94009 g18708 i0 82.5 0.759493670886076 40 7 75.9 0 5 124 316 355 WP_005583539.1 protein arginine kinase [Thermicanus aegyptius] diamond 120 72.8 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillales Family X. Incertae Sedis Thermicanus Thermicanus aegyptius
31421651 31421651 PRJNA766854_P_NODE_976_length_425_cov_4.792929_g861_i0 PRJNA766854 976 425 4.792929 20.36994825 Bacillaceae 186817 Bacteria Bacteria 47.8 4.31e-4   NR WP_377701007.1 251051 g861 i0 63.6 0.931764705882353 33 12 23.3 0 100 2 30 62 WP_377701007.1 transposase, partial [Pallidibacillus thermolactis] diamond 396 48.1 0.993762993762994 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Pallidibacillus Pallidibacillus thermolactis
31548402 31548402 PRJNA766854_P_NODE_856_length_443_cov_1.007246_g745_i0 PRJNA766854 856 443 1.007246 4.46209978 Bacillaceae 186817 Bacteria Bacteria 47.8 0.0041   NR MCL6574501.1 1409 g745 i0 40.2 2.76975169300226 82 17 55.5 1 5 250 126 175 MCL6574501.1 peptidase T [Bacillus sp. (in: firmicutes)] diamond 1227 47.8 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Bacillus Bacillus sp. (in: firmicutes)
32244493 32244493 PRJNA766854_P_NODE_218_length_687_cov_2.231003_g173_i0 PRJNA766854 218 687 2.231003 15.32699061 Thermicanus 94008 Bacteria Bacteria 55.8 2.56e-5   NR WP_028987458.1 94009 g173 i0 36.3 0.890829694323144 102 40 44.5 1 185 490 54 130 WP_028987458.1 Maf family protein [Thermicanus aegyptius] diamond 612 55.8 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillales Family X. Incertae Sedis Thermicanus Thermicanus aegyptius
32487826 32487826 PRJNA766854_P_NODE_599_length_504_cov_1.608421_g506_i0 PRJNA766854 599 504 1.608421 8.10644184 Caldibacillus debilis 301148 Bacteria Bacteria 91.7 1.99e-19   NR WP_276705789.1 301148 g506 i0 100 0.297619047619048 50 0 29.8 0 197 346 85 134 WP_276705789.1 PspA/IM30 family protein [Caldibacillus debilis] diamond 150 91.7 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Caldibacillus Caldibacillus debilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;