RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA764222" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA764222 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29326778 29326778 PRJNA764222_S_NODE_27949_length_177_cov_1.207692_g27791_i0 PRJNA764222 27949 177 1.207692 2.13761484 Tulosesus angulatus 980116 Fungi Fungi 42 0.028   NR KAF6744454.1 980116 g27791 i0 53.1 0.542372881355932 32 15 54.2 0 148 53 267 298 KAF6744454.1 hypothetical protein DFP72DRAFT_928775 [Tulosesus angulatus] diamond 96 42 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Psathyrellaceae Ephemerocybe Ephemerocybe angulata
31854784 31854784 PRJNA764222_S_NODE_6057_length_297_cov_1.588000_g5899_i0 PRJNA764222 6057 297 1.588 4.71636 Puccinia sorghi 27349 Fungi Fungi 44.7 0.0149   NR KNZ46246.1 27349 g5899 i0 30.4 0.797979797979798 79 54 78.8 1 285 52 294 372 KNZ46246.1 hypothetical protein VP01_743g2 [Puccinia sorghi] diamond 237 44.7 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Pucciniaceae Puccinia Puccinia sorghi
32740088 32740088 PRJNA764222_S_NODE_17480_length_221_cov_1.666667_g17322_i0 PRJNA764222 17480 221 1.666667 3.68333407 Collybiopsis confluens 2823264 Fungi Fungi 42.7 0.0284   NR KAF5380338.1 2823264 g17322 i0 34.3 0.950226244343891 70 42 89.6 1 2 199 230 299 KAF5380338.1 hypothetical protein D9757_007926 [Collybiopsis confluens] diamond 210 42.7 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Omphalotaceae Collybiopsis Collybiopsis confluens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;