RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA763718" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA763718 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28474414 28474414 PRJNA763718_S_NODE_7386_length_162_cov_0.936000_g7178_i0 PRJNA763718 7386 162 0.936 1.51632 Ceraceosorus guamensis 1522189 Fungi Fungi 74.3 1.3e-14   NR XP_025367729.1 1522189 g7178 i0 61.2 2.87037037037037 49 19 90.7 0 148 2 66 114 XP_025367729.1 ribosomal protein L13 [Ceraceosorus guamensis] diamond 465 74.3 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Ceraceosorales Ceraceosoraceae Ceraceosorus Ceraceosorus guamensis
31073951 31073951 PRJNA763718_S_NODE_8655_length_151_cov_1.342105_g8447_i0 PRJNA763718 8655 151 1.342105 2.02657855 Basidiomycota 5204 Fungi Fungi 82 8.93e-18   NR UZJ52785.1 63378 g8447 i0 80 30.794701986755 50 10 99.3 0 151 2 27 76 UZJ52785.1 hypothetical protein CBS101457_002105 [Exobasidium rhododendri] diamond 4650 82.8 0.990338164251208 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Exobasidiales Exobasidiaceae Exobasidium Exobasidium rhododendri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;