RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA763718" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA763718 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29390172 29390172 PRJNA763718_S_NODE_2549_length_284_cov_10.263158_g2341_i0 PRJNA763718 2549 284 10.263158 29.14736872 [Candida] jaroonii 467808 Fungi Fungi 43.9 0.00717   NR CAH6723999.1 467808 g2341 i0 70.4 0.285211267605634 27 8 28.5 0 53 133 18 44 CAH6723999.1 protein Tar1p [[Candida] jaroonii] diamond 81 43.9 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Yamadazyma [Candida] jaroonii
30147736 30147736 PRJNA763718_S_NODE_872_length_582_cov_5.383486_g684_i0 PRJNA763718 872 582 5.383486 31.33188852 Bombardia bombarda 252184 Fungi Fungi 46.2 0.0489   NR KAK0624696.1 252184 g684 i0 40.3 0.396907216494845 77 43 38.7 2 298 74 2 77 KAK0624696.1 kinesin motor domain-containing protein [Bombardia bombarda] diamond 231 46.2 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Sordariales Lasiosphaeriaceae Bombardia Bombardia bombarda

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;