RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA763718" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA763718 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27748406 27748406 PRJNA763718_S_NODE_3984_length_220_cov_12.054645_g3776_i0 PRJNA763718 3984 220 12.054645 26.520219 Anthophora plagiata 597819 Arthropoda Arthropoda 43.9 0.0102   NR CAK9813121.1 597819 g3776 i0 48.6 2.38636363636364 35 18 47.7 0 63 167 222 256 CAK9813121.1 Transposable element Tc1 transposase [Anthophora plagiata] diamond 525 44.3 0.99097065462754 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Hymenoptera Apidae Anthophora Anthophora plagiata
29326766 29326766 PRJNA763718_S_NODE_8769_length_150_cov_1.362832_g8561_i0 PRJNA763718 8769 150 1.362832 2.044248 Procambarus clarkii 6728 Arthropoda Arthropoda 100 6.31e-23   NR AYD41603.1 6728 g8561 i0 85.7 0.98 49 7 98 0 3 149 1437 1485 AYD41603.1 CD109 antigen-like protein, partial [Procambarus clarkii] diamond 147 100 1 Eukaryota Opisthokonta Metazoa Arthropoda Malacostraca Decapoda Cambaridae Procambarus Procambarus clarkii
32044728 32044728 PRJNA763718_S_NODE_7158_length_164_cov_1.401575_g6950_i0 PRJNA763718 7158 164 1.401575 2.298583 Daphnia pulex 6669 Arthropoda Arthropoda 72.4 3.89e-15   NR EFX60309.1 6669 g6950 i0 70.4 0.98780487804878 54 16 98.8 0 162 1 17 70 EFX60309.1 hypothetical protein DAPPUDRAFT_19918, partial [Daphnia pulex] diamond 162 72.4 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Diplostraca Daphniidae Daphnia Daphnia pulex

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;