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contig_metadata

28 rows where analysis = "diamond", bioproject = "PRJNA763243" and tax_phylum = "Myxococcota"

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tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 28 ✖

tax_kingdom 1

bioproject 1

  • PRJNA763243 · 28 ✖

analysis 1

  • diamond · 28 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4571782 4571782 PRJNA763243_P_NODE_45864_length_263_cov_1.436842_g45518_i0 PRJNA763243 45864 263 1.436842 3.77889446 Pseudomonadati 3379134 Bacteria Bacteria 98.6 9.02e-22   NR MDA8307955.1 2026735 g45518 i0 62.2 4.02661596958175 90 30 98.1 3 261 4 79 168 MDA8307955.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 1059 98.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
8396708 8396708 PRJNA763243_P_NODE_48107_length_258_cov_2.037838_g47761_i0 PRJNA763243 48107 258 2.037838 5.25762204 Archangiaceae bacterium 2684409 Bacteria Bacteria 161 1.48e-47   NR MBM4780508.1 2684409 g47761 i0 98.8 0.965116279069767 83 1 96.5 0 252 4 134 216 MBM4780508.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Archangiaceae bacterium] diamond 249 161 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae   Archangiaceae bacterium
14772270 14772270 PRJNA763243_P_NODE_43132_length_269_cov_2.806122_g42786_i0 PRJNA763243 43132 269 2.806122 7.54846818 Myxococcota bacterium 2818507 Bacteria Bacteria 129 1.66e-32   NR HEY1097601.1 2818507 g42786 i0 73.6 0.970260223048327 87 22 97 1 263 3 493 578 HEY1097601.1 hypothetical protein [Myxococcota bacterium] diamond 261 129 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
21145416 21145416 PRJNA763243_P_NODE_21397_length_344_cov_2.394834_g21051_i0 PRJNA763243 21397 344 2.394834 8.23822896 Myxococcaceae bacterium 2484252 Bacteria Bacteria 207 1.35e-63   NR RYZ13579.1 2484252 g21051 i0 92 0.976744186046512 112 9 97.7 0 339 4 158 269 RYZ13579.1 MAG: ABC-F family ATP-binding cassette domain-containing protein, partial [Myxococcaceae bacterium] diamond 336 207 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae   Myxococcaceae bacterium
26926599 26926599 PRJNA763243_P_NODE_29282_length_310_cov_3.721519_g28936_i0 PRJNA763243 29282 310 3.721519 11.5367089 Kofleriaceae bacterium 2212474 Bacteria Bacteria 65.5 5.78e-10   NR MEO8552225.1 2212474 g28936 i0 68.6 0.493548387096774 51 15 48.4 1 150 1 8 58 MEO8552225.1 tetratricopeptide repeat protein [Kofleriaceae bacterium] diamond 153 65.5 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
26958054 26958054 PRJNA763243_P_NODE_43922_length_267_cov_3.273196_g43576_i0 PRJNA763243 43922 267 3.273196 8.73943332 Archangium sp. 1872627 Bacteria Bacteria 56.6 1.22e-7   NR HEY0883035.1 1872627 g43576 i0 41 1.73033707865169 78 45 86.5 1 232 2 45 122 HEY0883035.1 hypothetical protein [Archangium sp.] diamond 462 56.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium sp.
27125618 27125618 PRJNA763243_P_NODE_35002_length_290_cov_8.894009_g34656_i0 PRJNA763243 35002 290 8.894009 25.7926261 Pseudomonadati 3379134 Bacteria Bacteria 160 1.4899999999999999e-46   NR HYG67028.1 2510643 g34656 i0 81.1 1.96551724137931 95 18 98.3 0 4 288 123 217 HYG67028.1 hypothetical protein [Anaeromyxobacteraceae bacterium] diamond 570 160 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Anaeromyxobacteraceae   Anaeromyxobacteraceae bacterium
27464096 27464096 PRJNA763243_P_NODE_15423_length_393_cov_1.512500_g15078_i0 PRJNA763243 15423 393 1.5125 5.944125 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 46.2 0.0119   NR MBI2390531.1 2026735 g15078 i0 34.3 0.801526717557252 105 61 80.2 3 335 21 704 800 MBI2390531.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 315 46.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
28032471 28032471 PRJNA763243_P_NODE_71045_length_215_cov_9.725352_g70699_i0 PRJNA763243 71045 215 9.7253520000000009 20.9095068 Kofleriaceae bacterium 2212474 Bacteria Bacteria 81.6 4.72e-16   NR HUJ57206.1 2212474 g70699 i0 55.7 3.90697674418605 70 30 97.7 1 5 214 290 358 HUJ57206.1 M20 family metallopeptidase [Kofleriaceae bacterium] diamond 840 81.6 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
28221604 28221604 PRJNA763243_P_NODE_75226_length_197_cov_6.451613_g74880_i0 PRJNA763243 75226 197 6.451613 12.70967761 Nannocystis pusilla 889268 Bacteria Bacteria 111 1.17e-28   NR WP_224189980.1 889268 g74880 i0 98.1 0.822335025380711 54 1 82.2 0 6 167 161 214 WP_224189980.1 hypothetical protein [Nannocystis pusilla] diamond 162 111 1 Bacteria   Pseudomonadati Myxococcota   Nannocystales Nannocystaceae Nannocystis Nannocystis pusilla
28736608 28736608 PRJNA763243_P_NODE_71747_length_212_cov_5.316547_g71401_i0 PRJNA763243 71747 212 5.316547 11.27107964 Bacteria 2 Bacteria Bacteria 90.9 2.76e-19   NR MBV8758391.1 2026735 g71401 i0 72.6 5.23584905660377 62 16 87.7 1 14 199 715 775 MBV8758391.1 GcvT family protein [Deltaproteobacteria bacterium] diamond 1110 90.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
28789984 28789984 PRJNA763243_P_NODE_65927_length_235_cov_2.635802_g65581_i0 PRJNA763243 65927 235 2.635802 6.1941347 Myxococcales bacterium 2026763 Bacteria Bacteria 122 4.92e-31   NR MBL9113141.1 2026763 g65581 i0 80.5 0.982978723404255 77 15 98.3 0 3 233 156 232 MBL9113141.1 MFS transporter [Myxococcales bacterium] diamond 231 122 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
28989434 28989434 PRJNA763243_P_NODE_10268_length_469_cov_2.005051_g9925_i0 PRJNA763243 10268 469 2.005051 9.40368919 root 1 Root_unresolved Root_unresolved 65.5 3.36e-9   NR MCA9601124.1 2026763 g9925 i0 33.6 4.07462686567164 113 74 71.6 1 459 124 211 323 MCA9601124.1 hypothetical protein [Myxococcales bacterium] diamond 1911 65.9 0.993930197268589 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
29021076 29021076 PRJNA763243_P_NODE_22368_length_338_cov_5.222642_g22022_i0 PRJNA763243 22368 338 5.222642 17.65252996 Pseudomonadati 3379134 Bacteria Bacteria 57 7.79e-7   NR MFT3769745.1 1971901 g22022 i0 45.9 1.08284023668639 61 31 52.4 1 179 3 4 64 MFT3769745.1 hypothetical protein [Minicystis sp.] diamond 366 57 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Minicystis Minicystis sp.
29169140 29169140 PRJNA763243_P_NODE_70629_length_217_cov_10.208333_g70283_i0 PRJNA763243 70629 217 10.208333 22.15208261 Myxococcales bacterium 2026763 Bacteria Bacteria 45.1 0.00417   NR NUN14370.1 2026763 g70283 i0 44.2 0.71889400921659 52 26 67.7 1 32 178 135 186 NUN14370.1 hypothetical protein [Myxococcales bacterium] diamond 156 45.1 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
29705282 29705282 PRJNA763243_P_NODE_19490_length_357_cov_2.630282_g19144_i0 PRJNA763243 19490 357 2.630282 9.39010674 Myxococcales bacterium 2026763 Bacteria Bacteria 90.5 9.47e-21   NR MCA9640749.1 2026763 g19144 i0 81 0.974789915966387 58 11 48.7 0 353 180 55 112 MCA9640749.1 hypothetical protein [Myxococcales bacterium] diamond 348 90.5 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
29990001 29990001 PRJNA763243_P_NODE_27471_length_311_cov_61.613445_g27125_i0 PRJNA763243 27471 311 61.613445 191.61781395 Myxococcota bacterium 2818507 Bacteria Bacteria 96.3 2.3400000000000003e-21   NR MEM9459905.1 2818507 g27125 i0 87.8 0.472668810289389 49 6 47.3 0 311 165 234 282 MEM9459905.1 SCO family protein [Myxococcota bacterium] diamond 147 96.3 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
30053035 30053035 PRJNA763243_P_NODE_48811_length_257_cov_1.027174_g48465_i0 PRJNA763243 48811 257 1.027174 2.63983718 Polyangiales bacterium 3034171 Bacteria Bacteria 53.1 7.82e-6   NR HET8933269.1 3034171 g48465 i0 33.3 0.980544747081712 84 53 96.9 2 9 257 180 261 HET8933269.1 fibrinogen-like YCDxxxxGGGW domain-containing protein [Polyangiales bacterium] diamond 252 53.1 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales     Polyangiales bacterium
30179409 30179409 PRJNA763243_P_NODE_43672_length_268_cov_1.487179_g43326_i0 PRJNA763243 43672 268 1.487179 3.98563972 Labilithrix sp. 1971228 Bacteria Bacteria 47 0.00157   NR MFO0738222.1 1971228 g43326 i0 38.4 0.962686567164179 86 46 96.3 3 3 260 329 407 MFO0738222.1 thrombospondin type-1 domain-containing protein [Labilithrix sp.] diamond 258 47 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.
30338008 30338008 PRJNA763243_P_NODE_70632_length_217_cov_9.854167_g70286_i0 PRJNA763243 70632 217 9.854167 21.38354239 Myxococcales bacterium 2026763 Bacteria Bacteria 43.5 0.0115   NR MCB9529711.1 2026763 g70286 i0 43.9 0.566820276497696 41 20 56.7 1 172 50 166 203 MCB9529711.1 hypothetical protein [Myxococcales bacterium] diamond 123 43.5 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
30432699 30432699 PRJNA763243_P_NODE_67693_length_229_cov_5.301282_g67347_i0 PRJNA763243 67693 229 5.301282 12.13993578 Kofleriaceae bacterium 2212474 Bacteria Bacteria 43.9 0.00611   NR HTR52097.1 2212474 g67347 i0 61.3 0.406113537117904 31 12 40.6 0 122 30 39 69 HTR52097.1 hypothetical protein [Kofleriaceae bacterium] diamond 93 43.9 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
30906449 30906449 PRJNA763243_P_NODE_64774_length_238_cov_51.945455_g64428_i0 PRJNA763243 64774 238 51.945455 123.6301829 Myxococcaceae bacterium 2484252 Bacteria Bacteria 49.7 1.21e-4   NR MDB5217168.1 2484252 g64428 i0 45.5 0.970588235294118 77 38 97.1 1 3 233 99 171 MDB5217168.1 Mechanosensitive ion channel family protein [Myxococcaceae bacterium] diamond 231 49.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae   Myxococcaceae bacterium
31221975 31221975 PRJNA763243_P_NODE_41335_length_273_cov_7.045000_g40989_i0 PRJNA763243 41335 273 7.045 19.23285 Hyalangium rubrum 3103134 Bacteria Bacteria 75.5 1.47e-13   NR WP_321544410.1 3103134 g40989 i0 59.1 0.725274725274725 66 27 72.5 0 67 264 344 409 WP_321544410.1 aldo/keto reductase [Hyalangium rubrum] diamond 198 75.5 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Hyalangium Hyalangium rubrum
31664893 31664893 PRJNA763243_P_NODE_29497_length_310_cov_3.033755_g29151_i0 PRJNA763243 29497 310 3.033755 9.4046405 Aetherobacter fasciculatus 888830 Bacteria Bacteria 45.1 0.0122   NR WP_346378682.1 888830 g29151 i0 34.3 0.648387096774194 67 42 64.8 1 103 303 74 138 WP_346378682.1 protein kinase domain-containing protein [Aetherobacter fasciculatus] diamond 201 45.1 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Aetherobacter Aetherobacter fasciculatus
31886390 31886390 PRJNA763243_P_NODE_58277_length_245_cov_1.662791_g57931_i0 PRJNA763243 58277 245 1.662791 4.07383795 Myxococcales bacterium 2026763 Bacteria Bacteria 117 9.8e-30   NR MBK6462578.1 2026763 g57931 i0 70 0.979591836734694 80 24 98 0 241 2 144 223 MBK6462578.1 hypothetical protein [Myxococcales bacterium] diamond 240 117 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
32171413 32171413 PRJNA763243_P_NODE_37818_length_282_cov_6.976077_g37472_i0 PRJNA763243 37818 282 6.976077 19.67253714 Myxococcota bacterium 2818507 Bacteria Bacteria 75.5 1.82e-13   NR HEY1100393.1 2818507 g37472 i0 44.9 0.946808510638298 89 48 94.7 1 278 12 732 819 HEY1100393.1 hypothetical protein [Myxococcota bacterium] diamond 267 75.5 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
32370900 32370900 PRJNA763243_P_NODE_50939_length_252_cov_5.519553_g50593_i0 PRJNA763243 50939 252 5.519553 13.90927356 root 1 Root_unresolved Root_unresolved 116 9.04e-29   NR WP_011421417.1 161493 g50593 i0 63 2.89285714285714 81 30 96.4 0 248 6 138 218 WP_011421417.1 acetyl-CoA C-acetyltransferase [Anaeromyxobacter dehalogenans] diamond 729 116 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Anaeromyxobacteraceae Anaeromyxobacter Anaeromyxobacter dehalogenans
32465828 32465828 PRJNA763243_P_NODE_46959_length_260_cov_10.684492_g46613_i0 PRJNA763243 46959 260 10.684492 27.7796792 Polyangium 55 Bacteria Bacteria 74.3 2.75e-13   NR HRG95686.1 2268199 g46613 i0 51.3 2.76923076923077 76 36 87.7 1 28 255 68 142 HRG95686.1 peroxiredoxin family protein [Polyangiaceae bacterium] diamond 720 74.3 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;