RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA763243" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA763243 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
743214 743214 PRJNA763243_P_NODE_36601_length_286_cov_1.215962_g36255_i0 PRJNA763243 36601 286 1.215962 3.47765132 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 142 1.68e-39   NR MES1907458.1 1215613 g36255 i0 75.8 0.954545454545455 91 22 95.5 0 284 12 44 134 MES1907458.1 hypothetical protein [Cercozoa sp. M6MM] diamond 273 142 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
17321710 17321710 PRJNA763243_P_NODE_44934_length_265_cov_1.562500_g44588_i0 PRJNA763243 44934 265 1.5625 4.140625 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 79.3 6.42e-15   NR AAP72162.1 188940 g44588 i0 76.6 5.20754716981132 94 14 97.4 1 262 5 144 237 AAP72162.1 heat shock protein 90, partial [Thaumatomonas sp. (SA)] diamond 1380 80.1 0.990012484394507 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Thaumatomonas Thaumatomonas sp. (SA)
28063804 28063804 PRJNA763243_P_NODE_16685_length_381_cov_0.990260_g16340_i0 PRJNA763243 16685 381 0.99026 3.7728906 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 88.2 2.16e-17   NR MES1909201.1 1215613 g16340 i0 47 1.03937007874016 132 62 97.6 4 373 2 133 264 MES1909201.1 hypothetical protein [Cercozoa sp. M6MM] diamond 396 88.2 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
32171441 32171441 PRJNA763243_P_NODE_8118_length_516_cov_2.550790_g7777_i0 PRJNA763243 8118 516 2.55079 13.1620764 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 137 4.12e-36   NR MES1911029.1 1215613 g7777 i0 49.7 0.854651162790698 147 68 83.1 2 3 431 161 305 MES1911029.1 hypothetical protein [Cercozoa sp. M6MM] diamond 441 137 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;