RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA763243" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA763243 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31253806 31253806 PRJNA763243_P_NODE_40595_length_275_cov_3.633663_g40249_i0 PRJNA763243 40595 275 3.633663 9.99257325 Fodinibius halophilus 1736908 Bacteria Bacteria 71.6 9.29e-13   NR WP_165270874.1 1736908 g40249 i0 50 0.72 66 33 72 0 273 76 163 228 WP_165270874.1 class I SAM-dependent methyltransferase [Fodinibius halophilus] diamond 198 71.6 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Fodinibius Fodinibius halophilus
32266363 32266363 PRJNA763243_P_NODE_12038_length_437_cov_12.456044_g11693_i0 PRJNA763243 12038 437 12.456044 54.43291228 Balneolales bacterium 2497613 Bacteria Bacteria 100 1.2600000000000002e-21   NR HKJ30596.1 2497613 g11693 i0 42.9 1.65446224256293 126 62 81.7 6 64 420 12 134 HKJ30596.1 phosphatidylinositol-specific phospholipase C domain-containing protein [Balneolales bacterium] diamond 723 100 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales     Balneolales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;