RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA763243" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA763243 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22420892 22420892 PRJNA763243_P_NODE_53878_length_249_cov_1.295455_g53532_i0 PRJNA763243 53878 249 1.295455 3.22568295 Dimorphilus gyrociliatus 2664684 Annelida Annelida 108 3.6499999999999998e-25   NR CAD5118409.1 2664684 g53532 i0 65.4 0.939759036144578 78 27 94 0 238 5 184 261 CAD5118409.1 DgyrCDS7118 [Dimorphilus gyrociliatus] diamond 234 108 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Dinophilidae Dimorphilus Dimorphilus gyrociliatus
26682840 26682840 PRJNA763243_P_NODE_13501_length_416_cov_2.588921_g13156_i0 PRJNA763243 13501 416 2.588921 10.76991136 Opisthokonta 33154 Annelida Annelida 154 6.47e-42   NR CAH1801246.1 6347 g13156 i0 52.2 7.78846153846154 136 63 97.4 2 1 405 193 327 CAH1801246.1 unnamed protein product [Owenia fusiformis] diamond 3240 154 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
28316515 28316515 PRJNA763243_P_NODE_33566_length_295_cov_1.463964_g33220_i0 PRJNA763243 33566 295 1.463964 4.3186938 Dimorphilus gyrociliatus 2664684 Annelida Annelida 67.8 1.12e-10   NR CAD5115146.1 2664684 g33220 i0 49.2 0.661016949152542 65 33 66.1 0 2 196 5 69 CAD5115146.1 DgyrCDS4150 [Dimorphilus gyrociliatus] diamond 195 67.8 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Dinophilidae Dimorphilus Dimorphilus gyrociliatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;