RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA760976" and tax_phylum = "Preaxostyla"

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tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA760976 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31485107 31485107 PRJNA760976_P_NODE_43396_length_262_cov_1.947090_g43075_i0 PRJNA760976 43396 262 1.94709 5.1013758 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 70.5 8.22e-12   NR KAJ4462581.1 342808 g43075 i0 54.9 3.65267175572519 71 31 81.3 1 213 1 39 108 KAJ4462581.1 putative DNA repair protein RAD50 [Paratrimastix pyriformis] diamond 957 70.9 0.994358251057828 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
31949546 31949546 PRJNA760976_P_NODE_48457_length_250_cov_1.248588_g48136_i0 PRJNA760976 48457 250 1.248588 3.12147 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 104 6.46e-25   NR KAJ4462711.1 342808 g48136 i0 67.1 0.948 79 26 94.8 0 10 246 89 167 KAJ4462711.1 putative 60S acidic ribosomal protein P0 [Paratrimastix pyriformis] diamond 237 104 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;