contig_metadata
11 rows where analysis = "diamond", bioproject = "PRJNA760976" and tax_phylum = "Bacillota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18594058 | 18594058 | PRJNA760976_P_NODE_43715_length_261_cov_2.377660_g43394_i0 | PRJNA760976 | 43715 | 261 | 2.37766 | 6.2056926 | Natranaerovirga hydrolytica | 680378 | Bacteria | Bacteria | 63.2 | 3.13e-9 | NR | WP_132282290.1 | 680378 | g43394 | i0 | 42.9 | 3.08045977011494 | 70 | 40 | 80.5 | 0 | 52 | 261 | 634 | 703 | WP_132282290.1 glycosyltransferase [Natranaerovirga hydrolytica] | diamond | 804 | 63.2 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Natranaerovirgaceae | Natranaerovirga | Natranaerovirga hydrolytica | ||
| 27969101 | 27969101 | PRJNA760976_P_NODE_29145_length_305_cov_3.310345_g28824_i0 | PRJNA760976 | 29145 | 305 | 3.310345 | 10.09655225 | Brevibacillus daliensis | 2892995 | Bacteria | Bacteria | 45.8 | 0.00599 | NR | WP_232696529.1 | 2892995 | g28824 | i0 | 29.5 | 1.0327868852459 | 105 | 62 | 91.5 | 4 | 302 | 24 | 286 | 390 | WP_232696529.1 NO-inducible flavohemoprotein [Brevibacillus daliensis] | diamond | 315 | 45.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Brevibacillus | Brevibacillus daliensis | ||
| 28253213 | 28253213 | PRJNA760976_P_NODE_51166_length_246_cov_0.890173_g50845_i0 | PRJNA760976 | 51166 | 246 | 0.890173 | 2.18982558 | Eremococcus coleocola | 88132 | Bacteria | Bacteria | 139 | 1.0799999999999998e-37 | NR | WP_006419019.1 | 88132 | g50845 | i0 | 87.8 | 1 | 82 | 10 | 100 | 0 | 1 | 246 | 93 | 174 | WP_006419019.1 thiolase family protein [Eremococcus coleocola] | diamond | 246 | 139 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Aerococcaceae | Eremococcus | Eremococcus coleocola | ||
| 28663817 | 28663817 | PRJNA760976_P_NODE_11547_length_426_cov_1.152975_g11227_i0 | PRJNA760976 | 11547 | 426 | 1.152975 | 4.9116735 | Paenibacillus tengchongensis | 2608684 | Bacteria | Bacteria | 73.6 | 1.78e-12 | NR | WP_151737566.1 | 2608684 | g11227 | i0 | 32.7 | 1.03521126760563 | 147 | 92 | 98.6 | 4 | 420 | 1 | 5 | 151 | WP_151737566.1 carbonic anhydrase [Paenibacillus tengchongensis] | diamond | 441 | 73.6 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus tengchongensis | ||
| 28894322 | 28894322 | PRJNA760976_P_NODE_48708_length_249_cov_2.545455_g48387_i0 | PRJNA760976 | 48708 | 249 | 2.545455 | 6.33818295 | Clostridium | 1485 | Bacteria | Bacteria | 71.2 | 4.37e-13 | NR | WP_332563247.1 | 1506 | g48387 | i0 | 48.1 | 2.65060240963855 | 77 | 40 | 92.8 | 0 | 246 | 16 | 27 | 103 | WP_332563247.1 ferritin-like domain-containing protein [Clostridium sp.] | diamond | 660 | 71.6 | 0.994413407821229 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium sp. | ||
| 29904992 | 29904992 | PRJNA760976_P_NODE_1651_length_979_cov_1.615894_g1412_i0 | PRJNA760976 | 1651 | 979 | 1.615894 | 15.81960226 | root | 1 | Root_unresolved | Root_unresolved | 105 | 7.480000000000001e-21 | NR | WP_073009723.1 | 1121298 | g1412 | i0 | 84.2 | 2.08988764044944 | 57 | 9 | 17.5 | 0 | 1 | 171 | 686 | 742 | WP_073009723.1 formate C-acetyltransferase [Clostridium amylolyticum] | diamond | 2046 | 105 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium amylolyticum | ||
| 31073937 | 31073937 | PRJNA760976_P_NODE_41415_length_267_cov_2.350515_g41094_i0 | PRJNA760976 | 41415 | 267 | 2.350515 | 6.27587505 | Bacillaceae | 186817 | Bacteria | Bacteria | 127 | 2.19e-33 | NR | WP_328164171.1 | 135735 | g41094 | i0 | 66.7 | 3.79775280898876 | 84 | 28 | 94.4 | 0 | 16 | 267 | 160 | 243 | WP_328164171.1 DMT family transporter [Priestia endophytica] | diamond | 1014 | 127 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Priestia | Priestia endophytica | ||
| 31317059 | 31317059 | PRJNA760976_P_NODE_40995_length_269_cov_1.142857_g40674_i0 | PRJNA760976 | 40995 | 269 | 1.142857 | 3.07428533 | Desnuesiella massiliensis | 1650662 | Bacteria | Bacteria | 105 | 4.51e-24 | NR | WP_055669362.1 | 1650662 | g40674 | i0 | 53.9 | 0.992565055762082 | 89 | 41 | 99.3 | 0 | 267 | 1 | 257 | 345 | WP_055669362.1 DUF3794 and LysM peptidoglycan-binding domain-containing protein [Desnuesiella massiliensis] | diamond | 267 | 105 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Desnuesiella | Desnuesiella massiliensis | ||
| 31358488 | 31358488 | PRJNA760976_P_NODE_38856_length_275_cov_0.787129_g38535_i0 | PRJNA760976 | 38856 | 275 | 0.787129 | 2.16460475 | FCB group | 1783270 | Bacteria | Bacteria | 46.6 | 0.00246 | NR | MCI5863028.1 | 1898203 | g38535 | i0 | 36.1 | 2.50909090909091 | 72 | 43 | 75.3 | 2 | 212 | 6 | 375 | 446 | MCI5863028.1 RICIN domain-containing protein [Lachnospiraceae bacterium] | diamond | 690 | 46.6 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Lachnospiraceae bacterium | |||
| 32361279 | 32361279 | PRJNA760976_P_NODE_53339_length_244_cov_0.859649_g53018_i0 | PRJNA760976 | 53339 | 244 | 0.859649 | 2.09754356 | Clostridium tunisiense | 219748 | Bacteria | Bacteria | 57.8 | 3.04e-9 | NR | WP_017414399.1 | 219748 | g53018 | i0 | 96.3 | 0.331967213114754 | 27 | 1 | 33.2 | 0 | 3 | 83 | 14 | 40 | WP_017414399.1 hypothetical protein [Clostridium tunisiense] | diamond | 81 | 57.8 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium tunisiense | ||
| 32465821 | 32465821 | PRJNA760976_P_NODE_8199_length_485_cov_2.563107_g7880_i0 | PRJNA760976 | 8199 | 485 | 2.563107 | 12.43106895 | root | 1 | Root_unresolved | Root_unresolved | 120 | 2.98e-28 | NR | WP_300302390.1 | 1872527 | g7880 | i0 | 62.2 | 8.98762886597938 | 90 | 34 | 55.7 | 0 | 359 | 90 | 3 | 92 | WP_300302390.1 hydroxylamine reductase [Anaerosolibacter sp.] | diamond | 4359 | 121 | 0.991735537190083 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Thermotaleaceae | Anaerosolibacter | Anaerosolibacter sp. |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;