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contig_metadata

14 rows where analysis = "diamond", bioproject = "PRJNA760976" and tax_clade = "PVC group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • PVC group · 14 ✖

bioproject 1

  • PRJNA760976 · 14 ✖

analysis 1

  • diamond · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3293632 3293632 PRJNA760976_P_NODE_31363_length_297_cov_2.008929_g31042_i0 PRJNA760976 31363 297 2.008929 5.96651913 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 129 2.49e-32   NR HEY5753501.1 2201154 g31042 i0 61.5 4.57575757575758 91 35 91.9 0 3 275 382 472 HEY5753501.1 alpha-galactosidase [Chthoniobacterales bacterium] diamond 1359 129 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
27811474 27811474 PRJNA760976_P_NODE_34064_length_289_cov_1.027778_g33743_i0 PRJNA760976 34064 289 1.027778 2.97027842 Gemmataceae bacterium 2052164 Bacteria Bacteria 99.4 8.34e-22   NR HEX3148041.1 2052164 g33743 i0 54.3 1.94117647058824 94 43 97.6 0 3 284 635 728 HEX3148041.1 hypothetical protein [Gemmataceae bacterium] diamond 561 99.4 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   Gemmataceae bacterium
28852974 28852974 PRJNA760976_P_NODE_56048_length_241_cov_1.351190_g55727_i0 PRJNA760976 56048 241 1.35119 3.2563679 Fuerstiella sp. 1936112 Bacteria Bacteria 74.7 1.71e-13   NR MEP3482112.1 1936112 g55727 i0 50 1.81742738589212 72 34 89.6 1 239 24 204 273 MEP3482112.1 NO-inducible flavohemoprotein [Fuerstiella sp.] diamond 438 74.7 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae Fuerstiella Fuerstiella sp.
28916098 28916098 PRJNA760976_P_NODE_39848_length_272_cov_1.155779_g39527_i0 PRJNA760976 39848 272 1.155779 3.14371888 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 95.5 1.2e-23   NR MBA3721671.1 2052176 g39527 i0 64.6 1.43382352941176 65 23 71.7 0 76 270 1 65 MBA3721671.1 CsbD family protein [Parachlamydiaceae bacterium] diamond 390 95.5 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium
28979659 28979659 PRJNA760976_P_NODE_41908_length_266_cov_1.554404_g41587_i0 PRJNA760976 41908 266 1.554404 4.13471464 Gemmataceae bacterium 2052164 Bacteria Bacteria 48.9 3.17e-4   NR HEY8503922.1 2052164 g41587 i0 37.7 0.868421052631579 77 39 86.8 3 231 1 266 333 HEY8503922.1 hypothetical protein [Gemmataceae bacterium] diamond 231 48.9 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   Gemmataceae bacterium
29526023 29526023 PRJNA760976_P_NODE_47910_length_251_cov_1.264045_g47589_i0 PRJNA760976 47910 251 1.264045 3.17275295 Pseudomonadati 3379134 Bacteria Bacteria 102 6.989999999999999e-24   NR MBS0634548.1 2026799 g47589 i0 61.8 3.70517928286853 76 29 90.8 0 249 22 28 103 MBS0634548.1 glycosyltransferase [Verrucomicrobiota bacterium] diamond 930 103 0.990291262135922 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30653276 30653276 PRJNA760976_P_NODE_49273_length_248_cov_2.600000_g48952_i0 PRJNA760976 49273 248 2.6 6.448 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 45.8 7.3e-4   NR MEI6341283.1 2026799 g48952 i0 58.1 0.375 31 13 37.5 0 105 13 4 34 MEI6341283.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 93 45.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30811400 30811400 PRJNA760976_P_NODE_35834_length_283_cov_1.442857_g35513_i0 PRJNA760976 35834 283 1.442857 4.08328531 Chlamydiota bacterium 2081524 Bacteria Bacteria 47.8 8.72e-4   NR MES2344608.1 2081524 g35513 i0 42.2 0.477031802120141 45 25 47.7 1 3 137 172 215 MES2344608.1 hypothetical protein [Chlamydiota bacterium] diamond 135 47.8 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
30843120 30843120 PRJNA760976_P_NODE_12134_length_418_cov_0.849275_g11814_i0 PRJNA760976 12134 418 0.849275 3.5499695 Planctomycetota bacterium 2026780 Bacteria Bacteria 56.2 4.75e-6   NR NLE60524.1 2026780 g11814 i0 37.6 0.839712918660287 117 69 83.3 3 409 62 67 180 NLE60524.1 carboxypeptidase regulatory-like domain-containing protein [Planctomycetota bacterium] diamond 351 56.2 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
30874591 30874591 PRJNA760976_P_NODE_46994_length_253_cov_1.633333_g46673_i0 PRJNA760976 46994 253 1.633333 4.13233249 Simkania sp. 34094 Bacteria Bacteria 152 4.39e-45   NR MCB1084326.1 34094 g46673 i0 78.3 0.984189723320158 83 18 98.4 0 253 5 47 129 MCB1084326.1 serine/threonine-protein kinase [Simkania sp.] diamond 249 152 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania sp.
31664863 31664863 PRJNA760976_P_NODE_51137_length_246_cov_0.890173_g50816_i0 PRJNA760976 51137 246 0.890173 2.18982558 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 42.4 0.0423   NR MCX6950839.1 2026799 g50816 i0 39.3 0.682926829268293 56 33 68.3 1 62 229 106 160 MCX6950839.1 phosphatase PAP2 family protein [Verrucomicrobiota bacterium] diamond 168 42.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32298122 32298122 PRJNA760976_P_NODE_39559_length_273_cov_0.950000_g39238_i0 PRJNA760976 39559 273 0.95 2.5935 Haloferula helveola 490095 Bacteria Bacteria 56.2 9.72e-7   NR WP_338688672.1 490095 g39238 i0 50 0.769230769230769 70 27 73.6 3 34 234 116 180 WP_338688672.1 IPT/TIG domain-containing protein [Haloferula helveola] diamond 210 56.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Haloferula Haloferula helveola
32613942 32613942 PRJNA760976_P_NODE_57040_length_239_cov_2.728916_g56719_i0 PRJNA760976 57040 239 2.728916 6.52210924 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 97.1 5.69e-22   NR HYY13565.1 2201154 g56719 i0 60 8.56066945606694 75 30 94.1 0 230 6 28 102 HYY13565.1 hypothetical protein [Chthoniobacterales bacterium] diamond 2046 97.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
32645092 32645092 PRJNA760976_P_NODE_53460_length_244_cov_0.859649_g53139_i0 PRJNA760976 53460 244 0.859649 2.09754356 Tepidisphaeraceae bacterium 2876886 Bacteria Bacteria 50.8 4.87e-5   NR HMB95802.1 2876886 g53139 i0 82.6 0.565573770491803 23 4 28.3 0 244 176 282 304 HMB95802.1 DUF4139 domain-containing protein [Tepidisphaeraceae bacterium] diamond 138 50.8 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Tepidisphaerales Tepidisphaeraceae   Tepidisphaeraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;