contig_metadata
11 rows where analysis = "diamond", bioproject = "PRJNA760904" and tax_kingdom = "Methanobacteriati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5845783 | 5845783 | PRJNA760904_P_NODE_12265_length_269_cov_1.290816_g12208_i0 | PRJNA760904 | 12265 | 269 | 1.290816 | 3.47229504 | uncultured Methanobrevibacter sp. | 253161 | Archaea | Archaea | 126 | 2.24e-31 | NR | WP_295614768.1 | 253161 | g12208 | i0 | 68.5 | 0.992565055762082 | 89 | 28 | 99.3 | 0 | 2 | 268 | 681 | 769 | WP_295614768.1 GTP-binding protein [uncultured Methanobrevibacter sp.] | diamond | 267 | 126 | 1 | Archaea | Methanomada group | Methanobacteriati | Methanobacteriota | Methanobacteria | Methanobacteriales | Methanobacteriaceae | Methanobrevibacter | uncultured Methanobrevibacter sp. | |
| 9670721 | 9670721 | PRJNA760904_P_NODE_9688_length_290_cov_1.142857_g9631_i0 | PRJNA760904 | 9688 | 290 | 1.142857 | 3.3142853 | Methanobacteriati | 3366610 | Archaea | Archaea | 144 | 4.41e-38 | NR | MDB3855351.1 | 2026739 | g9631 | i0 | 71.9 | 7.9448275862069 | 96 | 27 | 99.3 | 0 | 290 | 3 | 300 | 395 | MDB3855351.1 CTP synthase (glutamine hydrolyzing) [Methanobacteriota archaeon] | diamond | 2304 | 144 | 1 | Archaea | Methanobacteriati | Methanobacteriota | Methanobacteriota archaeon | ||||||
| 28231124 | 28231124 | PRJNA760904_P_NODE_13086_length_263_cov_1.078947_g13029_i0 | PRJNA760904 | 13086 | 263 | 1.078947 | 2.83763061 | Methanobacteriati | 3366610 | Archaea | Archaea | 64.3 | 7.98e-10 | NR | OIR22150.1 | 1888996 | g13029 | i0 | 39.1 | 7.97338403041825 | 87 | 35 | 99.2 | 2 | 3 | 263 | 30 | 98 | OIR22150.1 MAG: hypothetical protein BET99_01285 [Marine Group III euryarchaeote CG-Epi2] | diamond | 2097 | 64.3 | 1 | Archaea | Methanobacteriati | Thermoplasmatota | Thermoplasmata | Candidatus Thermoprofundales | Marine Group III euryarchaeote CG-Epi2 | ||||
| 28421028 | 28421028 | PRJNA760904_P_NODE_14966_length_251_cov_0.865169_g14909_i0 | PRJNA760904 | 14966 | 251 | 0.865169 | 2.17157419 | Methanobacteriati | 3366610 | Archaea | Archaea | 76.6 | 2.52e-14 | NR | RAH17199.1 | 2026739 | g14909 | i0 | 48.8 | 4.57768924302789 | 84 | 40 | 99.2 | 2 | 2 | 250 | 3 | 84 | RAH17199.1 MAG: hypothetical protein CMB58_000735 [Methanobacteriota archaeon] | diamond | 1149 | 76.6 | 1 | Archaea | Methanobacteriati | Methanobacteriota | Methanobacteriota archaeon | ||||||
| 29273141 | 29273141 | PRJNA760904_P_NODE_20309_length_241_cov_6.345238_g20252_i0 | PRJNA760904 | 20309 | 241 | 6.345238 | 15.29202358 | Archaea | 2157 | Archaea | Archaea | 105 | 1.3399999999999999e-24 | NR | KYK26992.1 | 1803821 | g20252 | i0 | 70.3 | 4.92946058091286 | 64 | 19 | 79.7 | 0 | 194 | 3 | 8 | 71 | KYK26992.1 MAG: proline--tRNA ligase [Euryarchaeota archaeon SM23-78] | diamond | 1188 | 106 | 0.990566037735849 | Archaea | Methanobacteriati | Methanobacteriota | Euryarchaeota archaeon SM23-78 | ||||||
| 29336534 | 29336534 | PRJNA760904_P_NODE_13749_length_257_cov_2.250000_g13692_i0 | PRJNA760904 | 13749 | 257 | 2.25 | 5.7825 | Methanobacteriaceae | 2159 | Archaea | Archaea | 44.7 | 0.00955 | NR | WP_066973734.1 | 55758 | g13692 | i0 | 46.2 | 1.52918287937743 | 39 | 21 | 45.5 | 0 | 235 | 119 | 184 | 222 | WP_066973734.1 beta strand repeat-containing protein [Methanobrevibacter filiformis] | diamond | 393 | 44.7 | 1 | Archaea | Methanomada group | Methanobacteriati | Methanobacteriota | Methanobacteria | Methanobacteriales | Methanobacteriaceae | Methanobrevibacter | Methanobrevibacter filiformis | |
| 29809959 | 29809959 | PRJNA760904_P_NODE_8991_length_299_cov_1.238938_g8934_i0 | PRJNA760904 | 8991 | 299 | 1.238938 | 3.70442462 | Archaea | 2157 | Archaea | Archaea | 46.2 | 0.00397 | NR | MCX6664660.1 | 2026739 | g8934 | i0 | 27.5 | 2.57859531772575 | 102 | 67 | 95.3 | 2 | 290 | 6 | 61 | 162 | MCX6664660.1 hypothetical protein [Methanobacteriota archaeon] | diamond | 771 | 46.2 | 1 | Archaea | Methanobacteriati | Methanobacteriota | Methanobacteriota archaeon | ||||||
| 30242811 | 30242811 | PRJNA760904_P_NODE_912_length_792_cov_3.588317_g862_i0 | PRJNA760904 | 912 | 792 | 3.588317 | 28.41947064 | Methanobacteriota archaeon | 2026739 | Archaea | Archaea | 49.7 | 0.00712 | NR | RMG21782.1 | 2026739 | g862 | i0 | 24 | 0.821969696969697 | 217 | 136 | 78.4 | 8 | 1 | 621 | 118 | 315 | RMG21782.1 MAG: hypothetical protein D6732_26870 [Methanobacteriota archaeon] | diamond | 651 | 49.7 | 1 | Archaea | Methanobacteriati | Methanobacteriota | Methanobacteriota archaeon | ||||||
| 30947675 | 30947675 | PRJNA760904_P_NODE_16234_length_248_cov_1.748571_g16177_i0 | PRJNA760904 | 16234 | 248 | 1.748571 | 4.33645608 | root | 1 | Root_unresolved | Root_unresolved | 75.5 | 9.06e-14 | NR | MDR0335267.1 | 2052168 | g16177 | i0 | 57.1 | 7.92338709677419 | 63 | 25 | 76.2 | 1 | 190 | 2 | 2 | 62 | MDR0335267.1 molecular chaperone DnaJ [Methanomassiliicoccaceae archaeon] | diamond | 1965 | 75.9 | 0.994729907773386 | Archaea | Methanobacteriati | Thermoplasmatota | Thermoplasmata | Methanomassiliicoccales | Methanomassiliicoccaceae | Methanomassiliicoccaceae archaeon | |||
| 32329707 | 32329707 | PRJNA760904_P_NODE_2959_length_475_cov_1.703980_g2902_i0 | PRJNA760904 | 2959 | 475 | 1.70398 | 8.093905 | Methanobacterium sp. MZD13 | 2164 | Archaea | Archaea | 57 | 4.67e-6 | NR | WP_416111484.1 | 3394378 | g2902 | i0 | 33.9 | 0.783157894736842 | 124 | 72 | 77.1 | 4 | 420 | 55 | 12 | 127 | WP_416111484.1 Ig-like domain repeat protein, partial [Methanobacterium sp. MZD130B] | diamond | 372 | 57 | 1 | Archaea | Methanomada group | Methanobacteriati | Methanobacteriota | Methanobacteria | Methanobacteriales | Methanobacteriaceae | Methanobacterium | Methanobacterium sp. MZD130B | |
| 32708309 | 32708309 | PRJNA760904_P_NODE_8840_length_301_cov_2.802632_g8783_i0 | PRJNA760904 | 8840 | 301 | 2.802632 | 8.43592232 | Halopenitus persicus | 1048396 | Archaea | Archaea | 46.2 | 0.00405 | NR | WP_096390081.1 | 1048396 | g8783 | i0 | 41.4 | 0.578073089700997 | 58 | 33 | 57.8 | 1 | 174 | 1 | 1 | 57 | WP_096390081.1 alpha/beta fold hydrolase [Halopenitus persicus] | diamond | 174 | 46.2 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Halobacteria | Halobacteriales | Haloferacaceae | Halopenitus | Halopenitus persicus |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;