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contig_metadata

19 rows where analysis = "diamond", bioproject = "PRJNA758770" and tax_phylum = "Myxococcota"

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tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 19 ✖

tax_kingdom 1

bioproject 1

  • PRJNA758770 · 19 ✖

analysis 1

  • diamond · 19 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3292061 3292061 PRJNA758770_S_NODE_32083_length_243_cov_0.911765_g31957_i0 PRJNA758770 32083 243 0.911765 2.21558895 Myxococcales bacterium 2026763 Bacteria Bacteria 129 5.5800000000000005e-33   NR MCA9593138.1 2026763 g31957 i0 78.8 0.987654320987654 80 17 98.8 0 241 2 120 199 MCA9593138.1 protein kinase [Myxococcales bacterium] diamond 240 129 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
4569098 4569098 PRJNA758770_S_NODE_29464_length_246_cov_0.901734_g29338_i0 PRJNA758770 29464 246 0.901734 2.21826564 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 164 9.72e-50   NR MBN8540170.1 2026735 g29338 i0 95.1 1 82 4 100 0 246 1 21 102 MBN8540170.1 inorganic diphosphatase [Deltaproteobacteria bacterium] diamond 246 164 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
18592506 18592506 PRJNA758770_S_NODE_32895_length_242_cov_0.905325_g32769_i0 PRJNA758770 32895 242 0.905325 2.1908865 Anaeromyxobacter dehalogenans 2CP-1 455488 Bacteria Bacteria 67 7.42e-11   NR ACL64142.1 455488 g32769 i0 50 0.892561983471074 72 36 89.3 0 27 242 157 228 ACL64142.1 conserved hypothetical protein [Anaeromyxobacter dehalogenans 2CP-1] diamond 216 67 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Anaeromyxobacteraceae Anaeromyxobacter Anaeromyxobacter dehalogenans
21606909 21606909 PRJNA758770_S_NODE_25337_length_251_cov_0.876404_g25211_i0 PRJNA758770 25337 251 0.876404 2.19977404 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 149 1.09e-40   NR MBN8540051.1 2026735 g25211 i0 91.6 0.99203187250996006 83 7 99.2 0 251 3 420 502 MBN8540051.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [Deltaproteobacteria bacterium] diamond 249 149 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27021479 27021479 PRJNA758770_S_NODE_17642_length_286_cov_1.023474_g17516_i0 PRJNA758770 17642 286 1.023474 2.92713564 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 144 5.289999999999999e-40   NR MBN8539208.1 2026735 g17516 i0 80 0.996503496503496 95 19 99.7 0 285 1 40 134 MBN8539208.1 peptidylprolyl isomerase [Deltaproteobacteria bacterium] diamond 285 144 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27274389 27274389 PRJNA758770_S_NODE_24203_length_252_cov_0.871508_g24077_i0 PRJNA758770 24203 252 0.871508 2.19620016 Haliangium ochraceum 80816 Bacteria Bacteria 57 4.11e-7   NR WP_012826750.1 80816 g24077 i0 45.5 0.785714285714286 66 34 76.2 1 249 58 369 434 WP_012826750.1 HAD-IA family hydrolase [Haliangium ochraceum] diamond 198 57 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae Haliangium Haliangium ochraceum
27590402 27590402 PRJNA758770_S_NODE_25804_length_250_cov_0.881356_g25678_i0 PRJNA758770 25804 250 0.881356 2.20339 Myxococcota bacterium 2818507 Bacteria Bacteria 163 9.81e-46   NR MCU0676092.1 2818507 g25678 i0 95.2 0.996 83 4 99.6 0 1 249 377 459 MCU0676092.1 hypothetical protein [Myxococcota bacterium] diamond 249 163 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
28411235 28411235 PRJNA758770_S_NODE_23346_length_253_cov_0.866667_g23220_i0 PRJNA758770 23346 253 0.866667 2.19266751 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 90.5 1.59e-20   NR MBN8541970.1 2026735 g23220 i0 51.2 0.99604743083004 84 41 99.6 0 2 253 10 93 MBN8541970.1 TlpA family protein disulfide reductase [Deltaproteobacteria bacterium] diamond 252 90.5 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29547608 29547608 PRJNA758770_S_NODE_32610_length_242_cov_0.923077_g32484_i0 PRJNA758770 32610 242 0.923077 2.23384634 Sandaracinus sp. 2024858 Bacteria Bacteria 58.9 6.92e-8   NR MCB9604609.1 2024858 g32484 i0 92.9 0.347107438016529 28 2 34.7 0 84 1 1 28 MCB9604609.1 acyl-CoA dehydrogenase family protein [Sandaracinus sp.] diamond 84 58.9 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Sandaracinaceae Sandaracinus Sandaracinus sp.
29895254 29895254 PRJNA758770_S_NODE_32331_length_242_cov_0.923077_g32205_i0 PRJNA758770 32331 242 0.923077 2.23384634 Anaeromyxobacter dehalogenans 2CP-1 455488 Bacteria Bacteria 64.7 4.05e-10   NR ACL64143.1 455488 g32205 i0 52.2 0.830578512396694 67 32 83.1 0 203 3 100 166 ACL64143.1 conserved hypothetical protein [Anaeromyxobacter dehalogenans 2CP-1] diamond 201 64.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Anaeromyxobacteraceae Anaeromyxobacter Anaeromyxobacter dehalogenans
30306347 30306347 PRJNA758770_S_NODE_31652_length_243_cov_0.917647_g31526_i0 PRJNA758770 31652 243 0.917647 2.22988221 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 157 2.67e-44   NR MBN8540168.1 2026735 g31526 i0 91.3 0.987654320987654 80 7 98.8 0 3 242 24 103 MBN8540168.1 LLM class flavin-dependent oxidoreductase [Deltaproteobacteria bacterium] diamond 240 157 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31221904 31221904 PRJNA758770_S_NODE_25895_length_250_cov_0.881356_g25769_i0 PRJNA758770 25895 250 0.881356 2.20339 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 142 7.58e-40   NR MBN8539473.1 2026735 g25769 i0 89.2 0.996 83 9 99.6 0 249 1 72 154 MBN8539473.1 flagellin FliC [Deltaproteobacteria bacterium] diamond 249 142 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31253745 31253745 PRJNA758770_S_NODE_27015_length_249_cov_0.886364_g26889_i0 PRJNA758770 27015 249 0.886364 2.20704636 Kofleriaceae bacterium 2212474 Bacteria Bacteria 136 4.2199999999999996e-38   NR MBP8807158.1 2212474 g26889 i0 92.1 1.83132530120482 76 6 91.6 0 230 3 1 76 MBP8807158.1 sigma-70 family RNA polymerase sigma factor [Kofleriaceae bacterium] diamond 456 136 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
31348789 31348789 PRJNA758770_S_NODE_25996_length_250_cov_0.881356_g25870_i0 PRJNA758770 25996 250 0.881356 2.20339 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 158 1.07e-44   NR MBN8542189.1 2026735 g25870 i0 86.7 0.996 83 11 99.6 0 1 249 121 203 MBN8542189.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 249 158 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31642873 31642873 PRJNA758770_S_NODE_31176_length_244_cov_0.912281_g31050_i0 PRJNA758770 31176 244 0.912281 2.22596564 PVC group 1783257 Bacteria Bacteria 76.6 3.83e-14   NR MBC8394130.1 2026735 g31050 i0 71.4 2.38524590163934 49 14 60.2 0 149 3 365 413 MBC8394130.1 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein [Deltaproteobacteria bacterium] diamond 582 77 0.994805194805195 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31674528 31674528 PRJNA758770_S_NODE_27557_length_248_cov_0.891429_g27431_i0 PRJNA758770 27557 248 0.891429 2.21074392 Pseudomonadati 3379134 Bacteria Bacteria 135 1.19e-37   NR MBN8541601.1 2026735 g27431 i0 79.3 1.98387096774194 82 17 99.2 0 247 2 118 199 MBN8541601.1 ATP-binding cassette domain-containing protein [Deltaproteobacteria bacterium] diamond 492 135 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32234742 32234742 PRJNA758770_S_NODE_30658_length_244_cov_0.912281_g30532_i0 PRJNA758770 30658 244 0.912281 2.22596564 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 59.7 1.3e-8   NR MBW2648103.1 2026735 g30532 i0 54.7 0.651639344262295 53 23 63.9 1 157 2 3 55 MBW2648103.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 159 59.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32298086 32298086 PRJNA758770_S_NODE_17399_length_287_cov_1.420561_g17273_i0 PRJNA758770 17399 287 1.420561 4.07701007 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 156 5.85e-42   NR MBN8541475.1 2026735 g17273 i0 75.8 0.993031358885017 95 23 99.3 0 2 286 207 301 MBN8541475.1 DUF3516 domain-containing protein [Deltaproteobacteria bacterium] diamond 285 156 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32551136 32551136 PRJNA758770_S_NODE_32599_length_242_cov_0.923077_g32473_i0 PRJNA758770 32599 242 0.923077 2.23384634 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 114 1.9999999999999997e-28   NR MBN8540238.1 2026735 g32473 i0 66.3 1.97107438016529 80 27 99.2 0 2 241 141 220 MBN8540238.1 DUF4421 family protein [Deltaproteobacteria bacterium] diamond 477 114 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;