contig_metadata
18 rows where analysis = "diamond", bioproject = "PRJNA758770" and tax_phylum = "Bdellovibrionota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 11408512 | 11408512 | PRJNA758770_S_NODE_30109_length_245_cov_0.906977_g29983_i0 | PRJNA758770 | 30109 | 245 | 0.906977 | 2.22209365 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 147 | 3.42e-42 | NR | MDX9731524.1 | 2053517 | g29983 | i0 | 87.5 | 1.97142857142857 | 80 | 10 | 98 | 0 | 6 | 245 | 26 | 105 | MDX9731524.1 glutamine-hydrolyzing GMP synthase [Bdellovibrionales bacterium] | diamond | 483 | 147 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 26736168 | 26736168 | PRJNA758770_S_NODE_31681_length_243_cov_0.917647_g31555_i0 | PRJNA758770 | 31681 | 243 | 0.917647 | 2.22988221 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 97.4 | 1.91e-22 | NR | MDX9731017.1 | 2053517 | g31555 | i0 | 87 | 1.59259259259259 | 54 | 7 | 66.7 | 0 | 162 | 1 | 45 | 98 | MDX9731017.1 outer membrane beta-barrel protein [Bdellovibrionales bacterium] | diamond | 387 | 97.4 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 27084744 | 27084744 | PRJNA758770_S_NODE_16122_length_296_cov_0.946188_g15996_i0 | PRJNA758770 | 16122 | 296 | 0.946188 | 2.80071648 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 139 | 8.62e-39 | NR | MCB0379473.1 | 2053517 | g15996 | i0 | 82.5 | 1.62162162162162 | 80 | 14 | 81.1 | 0 | 242 | 3 | 87 | 166 | MCB0379473.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 480 | 139 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 27147489 | 27147489 | PRJNA758770_S_NODE_23762_length_253_cov_0.866667_g23636_i0 | PRJNA758770 | 23762 | 253 | 0.866667 | 2.19266751 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 137 | 1.69e-36 | NR | MBK7889873.1 | 2053517 | g23636 | i0 | 80.2 | 4.80237154150198 | 81 | 16 | 96 | 0 | 11 | 253 | 281 | 361 | MBK7889873.1 transposase [Bdellovibrionales bacterium] | diamond | 1215 | 137 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 27779774 | 27779774 | PRJNA758770_S_NODE_24324_length_252_cov_0.871508_g24198_i0 | PRJNA758770 | 24324 | 252 | 0.871508 | 2.19620016 | Oligoflexia bacterium | 2599941 | Bacteria | Bacteria | 126 | 6.36e-33 | NR | MDZ4676294.1 | 2599941 | g24198 | i0 | 72.6 | 1 | 84 | 23 | 100 | 0 | 252 | 1 | 32 | 115 | MDZ4676294.1 ATP-binding protein [Oligoflexia bacterium] | diamond | 252 | 126 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Oligoflexia bacterium | |||||
| 27811440 | 27811440 | PRJNA758770_S_NODE_31684_length_243_cov_0.917647_g31558_i0 | PRJNA758770 | 31684 | 243 | 0.917647 | 2.22988221 | Oligoflexia bacterium | 2599941 | Bacteria | Bacteria | 172 | 1.46e-49 | NR | HRK02627.1 | 2599941 | g31558 | i0 | 100 | 1 | 81 | 0 | 100 | 0 | 1 | 243 | 323 | 403 | HRK02627.1 IS1380 family transposase [Oligoflexia bacterium] | diamond | 243 | 172 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Oligoflexia bacterium | |||||
| 27842638 | 27842638 | PRJNA758770_S_NODE_15164_length_303_cov_1.017391_g15038_i0 | PRJNA758770 | 15164 | 303 | 1.017391 | 3.08269473 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 112 | 1.48e-27 | NR | MCB0367795.1 | 2053517 | g15038 | i0 | 60 | 8.36633663366337 | 85 | 34 | 84.2 | 0 | 1 | 255 | 206 | 290 | MCB0367795.1 UTP--glucose-1-phosphate uridylyltransferase GalU [Bdellovibrionales bacterium] | diamond | 2535 | 112 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 28253169 | 28253169 | PRJNA758770_S_NODE_32426_length_242_cov_0.923077_g32300_i0 | PRJNA758770 | 32426 | 242 | 0.923077 | 2.23384634 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 139 | 2.3299999999999997e-37 | NR | MDZ4083043.1 | 2053517 | g32300 | i0 | 85 | 1.98347107438017 | 80 | 11 | 99.2 | 1 | 241 | 2 | 140 | 218 | MDZ4083043.1 S8 family serine peptidase [Bdellovibrionales bacterium] | diamond | 480 | 139 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 29926873 | 29926873 | PRJNA758770_S_NODE_26811_length_249_cov_0.886364_g26685_i0 | PRJNA758770 | 26811 | 249 | 0.886364 | 2.20704636 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 77 | 8.79e-15 | NR | HEY8280173.1 | 3034175 | g26685 | i0 | 52.4 | 1.01204819277108 | 84 | 37 | 97.6 | 2 | 248 | 6 | 72 | 155 | HEY8280173.1 hypothetical protein [Bdellovibrionota bacterium] | diamond | 252 | 77 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 29958279 | 29958279 | PRJNA758770_S_NODE_27111_length_249_cov_0.886364_g26985_i0 | PRJNA758770 | 27111 | 249 | 0.886364 | 2.20704636 | Bdellovibrio sp. | 28201 | Bacteria | Bacteria | 181 | 3.5799999999999995e-55 | NR | WP_347359704.1 | 28201 | g26985 | i0 | 98.8 | 2 | 83 | 1 | 100 | 0 | 1 | 249 | 38 | 120 | WP_347359704.1 peptide MFS transporter, partial [Bdellovibrio sp.] | diamond | 498 | 181 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. | ||
| 29989952 | 29989952 | PRJNA758770_S_NODE_31491_length_243_cov_1.129412_g31365_i0 | PRJNA758770 | 31491 | 243 | 1.129412 | 2.74447116 | Bdellovibrio sp. ZAP7 | 2231053 | Bacteria | Bacteria | 60.5 | 1.98e-8 | NR | WP_142701551.1 | 2231053 | g31365 | i0 | 56 | 0.617283950617284 | 50 | 22 | 61.7 | 0 | 242 | 93 | 27 | 76 | WP_142701551.1 KamA family radical SAM protein [Bdellovibrio sp. ZAP7] | diamond | 150 | 60.5 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. ZAP7 | ||
| 30021642 | 30021642 | PRJNA758770_S_NODE_30211_length_245_cov_0.906977_g30085_i0 | PRJNA758770 | 30211 | 245 | 0.906977 | 2.22209365 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 77.8 | 1.72e-14 | NR | MCB0349437.1 | 2053517 | g30085 | i0 | 52.1 | 0.869387755102041 | 71 | 31 | 83.3 | 1 | 40 | 243 | 376 | 446 | MCB0349437.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 213 | 77.8 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 30274524 | 30274524 | PRJNA758770_S_NODE_24352_length_252_cov_0.871508_g24226_i0 | PRJNA758770 | 24352 | 252 | 0.871508 | 2.19620016 | Pseudobdellovibrionaceae bacterium | 2026715 | Bacteria | Bacteria | 173 | 2.01e-48 | NR | MDY0029356.1 | 2026715 | g24226 | i0 | 100 | 0.988095238095238 | 83 | 0 | 98.8 | 0 | 3 | 251 | 482 | 564 | MDY0029356.1 SLBB domain-containing protein [Pseudobdellovibrionaceae bacterium] | diamond | 249 | 173 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 30748238 | 30748238 | PRJNA758770_S_NODE_25334_length_251_cov_0.876404_g25208_i0 | PRJNA758770 | 25334 | 251 | 0.876404 | 2.19977404 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 117 | 2.75e-29 | NR | MDZ4084828.1 | 2053517 | g25208 | i0 | 68.4 | 0.944223107569721 | 79 | 25 | 94.4 | 0 | 239 | 3 | 9 | 87 | MDZ4084828.1 TIGR03545 family protein [Bdellovibrionales bacterium] | diamond | 237 | 117 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 31136753 | 31136753 | PRJNA758770_S_NODE_24495_length_252_cov_0.871508_g24369_i0 | PRJNA758770 | 24495 | 252 | 0.871508 | 2.19620016 | Bdellovibrio | 958 | Bacteria | Bacteria | 143 | 3.98e-41 | NR | WP_226988008.1 | 959 | g24369 | i0 | 80.7 | 4.94047619047619 | 83 | 16 | 98.8 | 0 | 2 | 250 | 36 | 118 | WP_226988008.1 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [Bdellovibrio bacteriovorus] | diamond | 1245 | 144 | 0.993055555555556 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 31475290 | 31475290 | PRJNA758770_S_NODE_24656_length_252_cov_0.871508_g24530_i0 | PRJNA758770 | 24656 | 252 | 0.871508 | 2.19620016 | Micavibrio aeruginosavorus | 349221 | Bacteria | Bacteria | 129 | 4.48e-34 | NR | QQG36762.1 | 349221 | g24530 | i0 | 78.3 | 2.96428571428571 | 83 | 18 | 98.8 | 0 | 3 | 251 | 145 | 227 | QQG36762.1 MAG: NAD(P)-dependent glycerol-3-phosphate dehydrogenase [Micavibrio aeruginosavorus] | diamond | 747 | 129 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | Micavibrio aeruginosavorus | ||
| 32392620 | 32392620 | PRJNA758770_S_NODE_17139_length_289_cov_1.032407_g17013_i0 | PRJNA758770 | 17139 | 289 | 1.032407 | 2.98365623 | Pseudobdellovibrionaceae bacterium | 2026715 | Bacteria | Bacteria | 77.4 | 3.33e-14 | NR | MCC6137581.1 | 2026715 | g17013 | i0 | 69.4 | 0.508650519031142 | 49 | 15 | 50.9 | 0 | 149 | 3 | 258 | 306 | MCC6137581.1 site-specific integrase [Pseudobdellovibrionaceae bacterium] | diamond | 147 | 77.4 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 32834228 | 32834228 | PRJNA758770_S_NODE_18720_length_279_cov_1.135922_g18594_i0 | PRJNA758770 | 18720 | 279 | 1.135922 | 3.16922238 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 124 | 1.5599999999999998e-31 | NR | MDZ4082220.1 | 2053517 | g18594 | i0 | 61.4 | 0.946236559139785 | 88 | 34 | 94.6 | 0 | 16 | 279 | 12 | 99 | MDZ4082220.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 264 | 124 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;