contig_metadata
14 rows where analysis = "diamond", bioproject = "PRJNA758770" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7119449 | 7119449 | PRJNA758770_S_NODE_26686_length_249_cov_0.886364_g26560_i0 | PRJNA758770 | 26686 | 249 | 0.886364 | 2.20704636 | Microbacterium sp. 4NA327F11 | 2502229 | Bacteria | Bacteria | 120 | 1.49e-32 | NR | WP_137878045.1 | 2502229 | g26560 | i0 | 100 | 0.72289156626506 | 60 | 0 | 72.3 | 0 | 248 | 69 | 93 | 152 | WP_137878045.1 type II 3-dehydroquinate dehydratase [Microbacterium sp. 4NA327F11] | diamond | 180 | 120 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium sp. 4NA327F11 | ||
| 14769593 | 14769593 | PRJNA758770_S_NODE_28492_length_247_cov_0.896552_g28366_i0 | PRJNA758770 | 28492 | 247 | 0.896552 | 2.21448344 | Acidimicrobiia bacterium | 2080302 | Bacteria | Bacteria | 143 | 3.38e-39 | NR | MFN8103146.1 | 2080302 | g28366 | i0 | 82.9 | 0.995951417004049 | 82 | 14 | 99.6 | 0 | 1 | 246 | 183 | 264 | MFN8103146.1 fumarylacetoacetate hydrolase family protein [Acidimicrobiia bacterium] | diamond | 246 | 143 | 1 | Bacteria | Bacillati | Actinomycetota | Acidimicrobiia | Acidimicrobiia bacterium | |||||
| 23693617 | 23693617 | PRJNA758770_S_NODE_26259_length_250_cov_0.881356_g26133_i0 | PRJNA758770 | 26259 | 250 | 0.881356 | 2.20339 | Austwickia sp. | 1872664 | Bacteria | Bacteria | 161 | 3.1799999999999998e-46 | NR | MBK7721467.1 | 1872664 | g26133 | i0 | 96.4 | 0.996 | 83 | 3 | 99.6 | 0 | 249 | 1 | 239 | 321 | MBK7721467.1 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [Austwickia sp.] | diamond | 249 | 161 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Dermatophilaceae | Austwickia | Austwickia sp. | ||
| 26736166 | 26736166 | PRJNA758770_S_NODE_31201_length_244_cov_0.912281_g31075_i0 | PRJNA758770 | 31201 | 244 | 0.912281 | 2.22596564 | Kineosporiaceae bacterium | 2487580 | Bacteria | Bacteria | 88.6 | 8.63e-19 | NR | MBL8930629.1 | 2487580 | g31075 | i0 | 97.8 | 0.565573770491803 | 46 | 1 | 56.6 | 0 | 140 | 3 | 1 | 46 | MBL8930629.1 ATP-binding cassette domain-containing protein [Kineosporiaceae bacterium] | diamond | 138 | 88.6 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kineosporiales | Kineosporiaceae | Kineosporiaceae bacterium | |||
| 28000870 | 28000870 | PRJNA758770_S_NODE_30505_length_244_cov_1.619883_g30379_i0 | PRJNA758770 | 30505 | 244 | 1.619883 | 3.95251452 | Streptomyces flaveolus | 67297 | Bacteria | Bacteria | 41.2 | 0.0455 | NR | WP_350722076.1 | 67297 | g30379 | i0 | 34.2 | 0.971311475409836 | 79 | 34 | 75 | 2 | 6 | 188 | 7 | 85 | WP_350722076.1 LGFP repeat-containing protein [Streptomyces flaveolus] | diamond | 237 | 41.2 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces flaveolus | ||
| 28316453 | 28316453 | PRJNA758770_S_NODE_25186_length_251_cov_0.876404_g25060_i0 | PRJNA758770 | 25186 | 251 | 0.876404 | 2.19977404 | Solirubrobacteraceae bacterium | 2586742 | Bacteria | Bacteria | 59.7 | 2.64e-8 | NR | HEV2754138.1 | 2586742 | g25060 | i0 | 37.2 | 0.932270916334661 | 78 | 49 | 93.2 | 0 | 12 | 245 | 77 | 154 | HEV2754138.1 hypothetical protein [Solirubrobacteraceae bacterium] | diamond | 234 | 59.7 | 1 | Bacteria | Bacillati | Actinomycetota | Thermoleophilia | Solirubrobacterales | Solirubrobacteraceae | Solirubrobacteraceae bacterium | |||
| 28379533 | 28379533 | PRJNA758770_S_NODE_27906_length_248_cov_0.891429_g27780_i0 | PRJNA758770 | 27906 | 248 | 0.891429 | 2.21074392 | Mycolicibacterium hodleri | 49897 | Bacteria | Bacteria | 110 | 6.440000000000001e-27 | NR | WP_140691945.1 | 49897 | g27780 | i0 | 69 | 0.858870967741935 | 71 | 22 | 85.9 | 0 | 34 | 246 | 101 | 171 | WP_140691945.1 tyrosinase family protein [Mycolicibacterium hodleri] | diamond | 213 | 110 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycolicibacterium | Mycolicibacterium hodleri | ||
| 28600683 | 28600683 | PRJNA758770_S_NODE_29547_length_246_cov_0.901734_g29421_i0 | PRJNA758770 | 29547 | 246 | 0.901734 | 2.21826564 | Brevibacterium ravenspurgense | 479117 | Bacteria | Bacteria | 157 | 1.71e-42 | NR | WP_244878092.1 | 479117 | g29421 | i0 | 98.8 | 0.98780487804878 | 81 | 1 | 98.8 | 0 | 3 | 245 | 664 | 744 | WP_244878092.1 DNA gyrase/topoisomerase IV subunit A [Brevibacterium ravenspurgense] | diamond | 243 | 157 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Brevibacteriaceae | Brevibacterium | Brevibacterium ravenspurgense | ||
| 28916054 | 28916054 | PRJNA758770_S_NODE_31208_length_244_cov_0.912281_g31082_i0 | PRJNA758770 | 31208 | 244 | 0.912281 | 2.22596564 | Planotetraspora kaengkrachanensis | 575193 | Bacteria | Bacteria | 58.5 | 9.9e-8 | NR | WP_203880655.1 | 575193 | g31082 | i0 | 63 | 1.25409836065574 | 46 | 17 | 56.6 | 0 | 235 | 98 | 325 | 370 | WP_203880655.1 glycosyltransferase family 4 protein [Planotetraspora kaengkrachanensis] | diamond | 306 | 58.5 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Streptosporangiales | Streptosporangiaceae | Planotetraspora | Planotetraspora kaengkrachanensis | ||
| 29579099 | 29579099 | PRJNA758770_S_NODE_31610_length_243_cov_0.917647_g31484_i0 | PRJNA758770 | 31610 | 243 | 0.917647 | 2.22988221 | Pengzhenrongella sp. | 2888820 | Bacteria | Bacteria | 77.8 | 6.94e-17 | NR | HEY5516400.1 | 2888820 | g31484 | i0 | 69 | 1.2962962962963 | 58 | 16 | 71.6 | 1 | 180 | 7 | 2 | 57 | HEY5516400.1 hypothetical protein [Pengzhenrongella sp.] | diamond | 315 | 77.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Pengzhenrongella | Pengzhenrongella sp. | |||
| 31728107 | 31728107 | PRJNA758770_S_NODE_15437_length_301_cov_0.960526_g15311_i0 | PRJNA758770 | 15437 | 301 | 0.960526 | 2.89118326 | Nocardioides sp. | 35761 | Bacteria | Bacteria | 43.1 | 0.0169 | NR | WP_331527776.1 | 35761 | g15311 | i0 | 33.3 | 0.687707641196013 | 69 | 33 | 60.8 | 2 | 92 | 274 | 9 | 72 | WP_331527776.1 LPXTG cell wall anchor domain-containing protein [Nocardioides sp.] | diamond | 207 | 43.1 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Nocardioidaceae | Nocardioides | Nocardioides sp. | ||
| 31886310 | 31886310 | PRJNA758770_S_NODE_24317_length_252_cov_0.871508_g24191_i0 | PRJNA758770 | 24317 | 252 | 0.871508 | 2.19620016 | Actinomycetales bacterium | 1911520 | Bacteria | Bacteria | 173 | 4.5e-50 | NR | NLE72998.1 | 1911520 | g24191 | i0 | 100 | 1 | 84 | 0 | 100 | 0 | 1 | 252 | 59 | 142 | NLE72998.1 GGDEF domain-containing protein [Actinomycetales bacterium] | diamond | 252 | 173 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Actinomycetales | Actinomycetales bacterium | ||||
| 31896048 | 31896048 | PRJNA758770_S_NODE_30737_length_244_cov_0.912281_g30611_i0 | PRJNA758770 | 30737 | 244 | 0.912281 | 2.22596564 | Bacillati | 1783272 | Bacteria | Bacteria | 127 | 2.53e-34 | NR | HEY5844433.1 | 1785 | g30611 | i0 | 77.8 | 22.905737704918 | 81 | 18 | 99.6 | 0 | 243 | 1 | 158 | 238 | HEY5844433.1 3-oxoacyl-ACP reductase family protein [Mycobacterium sp.] | diamond | 5589 | 127 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium sp. | ||
| 32139562 | 32139562 | PRJNA758770_S_NODE_24118_length_252_cov_0.871508_g23992_i0 | PRJNA758770 | 24118 | 252 | 0.871508 | 2.19620016 | Actinoplanes sp. OR16 | 946334 | Bacteria | Bacteria | 55.8 | 8.87e-7 | NR | WP_232050000.1 | 946334 | g23992 | i0 | 62.5 | 0.785714285714286 | 40 | 15 | 47.6 | 0 | 131 | 250 | 1 | 40 | WP_232050000.1 GlxA family transcriptional regulator [Actinoplanes sp. OR16] | diamond | 198 | 55.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micromonosporales | Micromonosporaceae | Actinoplanes | Actinoplanes sp. OR16 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;