RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA758398" and tax_phylum = "Thermoproteota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoproteota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA758398 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28199592 28199592 PRJNA758398_S_NODE_12966_length_273_cov_1.044643_g12825_i0 PRJNA758398 12966 273 1.044643 2.85187539 Thermoprotei 183924 Archaea Archaea 50.8 7.94e-5   NR MCC6010914.1 2184738 g12825 i0 46.9 2.18681318681319 49 26 53.8 0 58 204 603 651 MCC6010914.1 DNA-directed RNA polymerase subunit B [Desulfurococcaceae archaeon] diamond 597 50.8 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Desulfurococcaceae   Desulfurococcaceae archaeon
31548370 31548370 PRJNA758398_S_NODE_30656_length_192_cov_1.426573_g30515_i0 PRJNA758398 30656 192 1.426573 2.73902016 root 1 Root_unresolved Root_unresolved 55.1 7.67e-7   NR WP_011921397.1 41980 g30515 i0 60 2.296875 45 15 65.6 1 169 44 196 240 WP_011921397.1 MULTISPECIES: daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein [Metallosphaera] diamond 441 55.1 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Metallosphaera  

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;