RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA758398" and tax_phylum = "Prasinodermophyta"

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tax_superkingdom 1

tax_phylum 1

  • Prasinodermophyta · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA758398 · 1 ✖

analysis 1

  • diamond · 1 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28894301 28894301 PRJNA758398_S_NODE_32288_length_188_cov_1.230216_g32147_i0 PRJNA758398 32288 188 1.230216 2.31280608 Viridiplantae 33090 Plants Plants 80.1 1.19e-15   NR QGN73941.1 110672 g32147 i0 86 11.6648936170213 43 6 68.6 0 130 2 43 85 QGN73941.1 ATP synthase F1 subunit alpha [Prasinococcus sp. CCMP1194] diamond 2193 80.1 1 Eukaryota   Viridiplantae Prasinodermophyta Palmophyllophyceae Prasinococcales Prasinococcaceae Prasinococcus Prasinococcus sp. CCMP1194

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;