RNAquarium Metadata Server
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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA758398" and tax_phylum = "Parabasalia"

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tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 11 ✖

tax_clade 1

bioproject 1

  • PRJNA758398 · 11 ✖

analysis 1

  • diamond · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13493267 13493267 PRJNA758398_S_NODE_11391_length_288_cov_1.799163_g11250_i0 PRJNA758398 11391 288 1.799163 5.18158944 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 124 6.15e-32   NR AAD45335.1 5722 g11250 i0 63.2 2.97916666666667 95 35 99 0 287 3 166 260 AAD45335.1 enolase 2, partial [Trichomonas vaginalis] diamond 858 124 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
27252364 27252364 PRJNA758398_S_NODE_51883_length_162_cov_0.902655_g51742_i0 PRJNA758398 51883 162 0.902655 1.4623011 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 41.6 0.0319   NR XP_067770931.1 135588 g51742 i0 56.8 1.35185185185185 37 16 68.5 0 50 160 23 59 XP_067770931.1 Proteasome/cyclosome repeat family protein [Histomonas meleagridis] diamond 219 42 0.990476190476191 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
27842609 27842609 PRJNA758398_S_NODE_42024_length_167_cov_1.288136_g41883_i0 PRJNA758398 42024 167 1.288136 2.15118712 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 46.2 7.97e-4   NR XP_068359617.1 1144522 g41883 i0 54.5 0.592814371257485 33 15 59.3 0 119 21 215 247 XP_068359617.1 uncharacterized protein TRFO_25509 [Tritrichomonas foetus] diamond 99 46.2 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
29484338 29484338 PRJNA758398_S_NODE_39950_length_171_cov_1.254098_g39809_i0 PRJNA758398 39950 171 1.254098 2.14450758 Reticulitermes flavipes gut symbiont cell-4 332196 Parabasalia other_Eukaryota 97.8 9.86e-23   NR AAY83392.1 332196 g39809 i0 75 0.982456140350877 56 14 98.2 0 169 2 137 192 AAY83392.1 exoglucanase-type cellulase [Reticulitermes flavipes gut symbiont cell-4] diamond 168 97.8 1 Eukaryota Metamonada   Parabasalia         Reticulitermes flavipes gut symbiont cell-4
29610545 29610545 PRJNA758398_S_NODE_19050_length_231_cov_2.000000_g18909_i0 PRJNA758398 19050 231 2 4.62 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 51.6 2.13e-5   NR XP_068347378.1 1144522 g18909 i0 76 0.324675324675325 25 6 32.5 0 170 96 66 90 XP_068347378.1 uncharacterized protein TRFO_39569 [Tritrichomonas foetus] diamond 75 51.6 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
29841685 29841685 PRJNA758398_S_NODE_21691_length_220_cov_1.192982_g21550_i0 PRJNA758398 21691 220 1.192982 2.6245604 Tritrichomonadida 740972 Parabasalia other_Eukaryota 73.6 2.56e-14   NR XP_067770659.1 135588 g21550 i0 50.8 1.60909090909091 59 29 80.5 0 5 181 53 111 XP_067770659.1 Thymidylate kinase [Histomonas meleagridis] diamond 354 73.6 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
30084544 30084544 PRJNA758398_S_NODE_7372_length_353_cov_1.802632_g7231_i0 PRJNA758398 7372 353 1.802632 6.36329096 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 47 0.00423   NR XP_068361143.1 1144522 g7231 i0 31.1 1.58923512747875 119 70 90.9 3 329 9 628 746 XP_068361143.1 uncharacterized protein TRFO_23625 [Tritrichomonas foetus] diamond 561 47 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
30401094 30401094 PRJNA758398_S_NODE_41853_length_167_cov_1.296610_g41712_i0 PRJNA758398 41853 167 1.29661 2.1653387 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 75.1 1.32e-14   NR XP_068358136.1 1144522 g41712 i0 61.1 5.87425149700599 54 21 97 0 166 5 148 201 XP_068358136.1 ribosomal protein L7Ae [Tritrichomonas foetus] diamond 981 75.1 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
30748229 30748229 PRJNA758398_S_NODE_574_length_1079_cov_3.663107_g515_i0 PRJNA758398 574 1079 3.663107 39.52492453 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 72.4 1.12e-9   NR XP_068349620.1 1144522 g515 i0 31.5 0.353104726598703 127 78 33.9 6 458 93 425 547 XP_068349620.1 uncharacterized protein TRFO_37341 [Tritrichomonas foetus] diamond 381 72.4 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
30969522 30969522 PRJNA758398_S_NODE_55634_length_151_cov_2.392157_g55493_i0 PRJNA758398 55634 151 2.392157 3.61215707 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 60.8 1.19e-9   NR XP_001301101.1 412133 g55493 i0 65.2 1.88741721854305 46 16 91.4 0 149 12 101 146 XP_001301101.1 ribosomal protein family [Trichomonas vaginalis G3] diamond 285 60.8 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
32456076 32456076 PRJNA758398_S_NODE_30079_length_194_cov_1.048276_g29938_i0 PRJNA758398 30079 194 1.048276 2.03365544 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 105 5.67e-27   NR XP_001313641.1 412133 g29938 i0 73.4 5.93814432989691 64 17 99 0 193 2 59 122 XP_001313641.1 histone ubiquitination [Trichomonas vaginalis G3] diamond 1152 105 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;