RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA758398" and tax_phylum = "Candidatus Cloacimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Cloacimonadota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA758398 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27716857 27716857 PRJNA758398_S_NODE_4104_length_467_cov_2.145933_g3963_i0 PRJNA758398 4104 467 2.145933 10.02150711 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 165 2.3099999999999994e-48   NR MDD3052620.1 2030808 g3963 i0 94.3 0.558886509635974 87 5 55.9 0 466 206 120 206 MDD3052620.1 hypothetical protein [Candidatus Cloacimonadota bacterium] diamond 261 165 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
28347922 28347922 PRJNA758398_S_NODE_426_length_1194_cov_2.523144_g377_i0 PRJNA758398 426 1194 2.523144 30.12633936 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 335 8.869999999999999e-112   NR MDD3052618.1 2030808 g377 i0 79.8 0.510050251256281 203 40 50.8 1 1182 577 2 204 MDD3052618.1 hypothetical protein [Candidatus Cloacimonadota bacterium] diamond 609 335 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
30906291 30906291 PRJNA758398_S_NODE_15334_length_253_cov_1.995098_g15193_i0 PRJNA758398 15334 253 1.995098 5.04759794 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 105 9.999999999999999e-27   NR MDD3052619.1 2030808 g15193 i0 68.7 0.984189723320158 83 26 98.4 0 251 3 37 119 MDD3052619.1 hypothetical protein [Candidatus Cloacimonadota bacterium] diamond 249 105 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
31253734 31253734 PRJNA758398_S_NODE_54895_length_159_cov_3.245455_g54754_i0 PRJNA758398 54895 159 3.245455 5.16027345 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 87 6.93e-20   NR MDD3052619.1 2030808 g54754 i0 73.1 0.981132075471698 52 14 98.1 0 3 158 111 162 MDD3052619.1 hypothetical protein [Candidatus Cloacimonadota bacterium] diamond 156 87 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;