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contig_metadata

28 rows where analysis = "diamond", bioproject = "PRJNA758088" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 28 ✖

bioproject 1

  • PRJNA758088 · 28 ✖

analysis 1

  • diamond · 28 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26641421 26641421 PRJNA758088_P_NODE_301441_length_249_cov_0.875000_g294470_i0 PRJNA758088 301441 249 0.875 2.17875 Nitrosarchaeum sp. 2026886 Archaea Archaea 116 3.63e-28   NR MFB5612793.1 2026886 g294470 i0 73.2 0.987951807228916 82 22 98.8 0 3 248 505 586 MFB5612793.1 molecular chaperone DnaK [Nitrosarchaeum sp.] diamond 246 116 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Nitrosarchaeum sp.
26736070 26736070 PRJNA758088_P_NODE_310661_length_248_cov_0.874286_g303690_i0 PRJNA758088 310661 248 0.874286 2.16822928 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 87.8 5.47e-18   NR MDT8781956.1 2026714 g303690 i0 57.7 2.47983870967742 71 28 85.9 1 246 34 563 631 MDT8781956.1 N-6 DNA methylase [Candidatus Bathyarchaeota archaeon] diamond 615 87.8 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
26736074 26736074 PRJNA758088_P_NODE_334021_length_245_cov_0.895349_g327050_i0 PRJNA758088 334021 245 0.895349 2.19360505 Nanobdellota archaeon 2026764 Archaea Archaea 70.5 3.71e-12   NR MCA9485851.1 2026764 g327050 i0 52.5 2.03265306122449 80 33 98 2 4 243 210 284 MCA9485851.1 hypothetical protein [Nanoarchaeota archaeon] diamond 498 70.5 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
26768152 26768152 PRJNA758088_P_NODE_359461_length_242_cov_0.875740_g352490_i0 PRJNA758088 359461 242 0.87574 2.1192908 Nitrosopumilaceae archaeon 2202732 Archaea Archaea 62.4 4.26e-9   NR HET6457666.1 2202732 g352490 i0 58.7 2.24380165289256 46 19 57 0 219 82 366 411 HET6457666.1 hypothetical protein [Nitrosopumilaceae archaeon] diamond 543 62.4 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae   Nitrosopumilaceae archaeon
27179205 27179205 PRJNA758088_P_NODE_126962_length_373_cov_0.993333_g119991_i0 PRJNA758088 126962 373 0.993333 3.70513209 archaeon 1906665 Archaea Archaea 108 2.63e-25   NR MCQ2053080.1 1906665 g119991 i0 48.2 0.900804289544236 112 58 90.1 0 37 372 1 112 MCQ2053080.1 phage DNA encapsidation protein [archaeon] diamond 336 108 1 Archaea               archaeon
27274262 27274262 PRJNA758088_P_NODE_149983_length_344_cov_1.136531_g143012_i0 PRJNA758088 149983 344 1.136531 3.90966664 Nitrososphaera sp. 1971748 Archaea Archaea 98.2 1.64e-24   NR MCY1156862.1 1971748 g143012 i0 96.1 0.444767441860465 51 2 44.5 0 153 1 1 51 MCY1156862.1 hypothetical protein [Nitrososphaera sp.] diamond 153 98.2 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
27369382 27369382 PRJNA758088_P_NODE_314143_length_247_cov_0.885057_g307172_i0 PRJNA758088 314143 247 0.885057 2.18609079 Methanobacteriota archaeon 2026739 Archaea Archaea 56.6 4.67e-7   NR MAH97924.1 2026739 g307172 i0 33.3 0.874493927125506 72 48 87.4 0 31 246 189 260 MAH97924.1 hypothetical protein [Methanobacteriota archaeon] diamond 216 56.6 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
27590266 27590266 PRJNA758088_P_NODE_218824_length_288_cov_1.116279_g211853_i0 PRJNA758088 218824 288 1.116279 3.21488352 Methanobrevibacter sp. 66852 Archaea Archaea 99.4 3.0799999999999994e-24   NR WP_407454095.1 66852 g211853 i0 92.2 1.03125 51 4 53.1 0 155 3 1 51 WP_407454095.1 hypothetical protein [Methanobrevibacter sp.] diamond 297 99.4 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
27874248 27874248 PRJNA758088_P_NODE_345745_length_243_cov_0.905882_g338774_i0 PRJNA758088 345745 243 0.905882 2.20129326 Methanocorpusculum sp. 2058474 Archaea Archaea 155 1.87e-45   NR HJJ69380.1 2058474 g338774 i0 100 0.987654320987654 80 0 98.8 0 242 3 43 122 HJJ69380.1 hypothetical protein [Methanocorpusculum sp.] diamond 240 155 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanocorpusculaceae Methanocorpusculum Methanocorpusculum sp.
28199582 28199582 PRJNA758088_P_NODE_321906_length_246_cov_0.890173_g314935_i0 PRJNA758088 321906 246 0.890173 2.18982558 Methanosarcina 2207 Archaea Archaea 140 5.8e-39   NR WP_229390002.1 2605639 g314935 i0 87.8 3 82 10 100 0 1 246 90 171 WP_229390002.1 YihY/virulence factor BrkB family protein [Methanosarcina sp. DH2] diamond 738 141 0.99290780141844 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp. DH2
28389169 28389169 PRJNA758088_P_NODE_316886_length_247_cov_0.885057_g309915_i0 PRJNA758088 316886 247 0.885057 2.18609079 Archaea 2157 Archaea Archaea 45.8 0.00265   NR MBI2444871.1 2250274 g309915 i0 36.6 2.46558704453441 71 37 86.2 1 4 216 106 168 MBI2444871.1 aquaporin [Candidatus Micrarchaeota archaeon] diamond 609 45.8 1 Archaea   Nanobdellati Candidatus Micrarchaeota         Candidatus Micrarchaeota archaeon
28568831 28568831 PRJNA758088_P_NODE_331947_length_245_cov_0.895349_g324976_i0 PRJNA758088 331947 245 0.895349 2.19360505 archaeon 1906665 Archaea Archaea 82.4 3.78e-16   NR RYG64032.1 1906665 g324976 i0 48.1 0.96734693877551 79 41 96.7 0 240 4 279 357 RYG64032.1 MAG: hypothetical protein EON64_14800 [archaeon] diamond 237 82.4 1 Archaea               archaeon
28789776 28789776 PRJNA758088_P_NODE_358167_length_242_cov_0.911243_g351196_i0 PRJNA758088 358167 242 0.911243 2.20520806 archaeon 1906665 Archaea Archaea 69.3 1.65e-13   NR RYH13002.1 1906665 g351196 i0 76.3 0.942148760330578 38 9 47.1 0 240 127 27 64 RYH13002.1 MAG: hypothetical protein EON65_36730 [archaeon] diamond 228 69.3 1 Archaea               archaeon
28821174 28821174 PRJNA758088_P_NODE_300288_length_249_cov_0.875000_g293317_i0 PRJNA758088 300288 249 0.875 2.17875 Candidatus Micrarchaeia archaeon 3018267 Archaea Archaea 78.2 1.03e-14   NR MFA5106219.1 3018267 g293317 i0 44.9 5.6144578313253 78 43 94 0 236 3 26 103 MFA5106219.1 acetylornithine transaminase [Candidatus Micrarchaeia archaeon] diamond 1398 78.2 1 Archaea   Nanobdellati Candidatus Micrarchaeota Candidatus Micrarchaeia       Candidatus Micrarchaeia archaeon
29895139 29895139 PRJNA758088_P_NODE_252831_length_267_cov_1.190722_g245860_i0 PRJNA758088 252831 267 1.190722 3.17922774 Promethearchaeota archaeon 2053489 Archaea Archaea 43.9 0.0118   NR TFG02163.1 2053489 g245860 i0 73.1 0.292134831460674 26 7 29.2 0 78 1 144 169 TFG02163.1 MAG: GTP-binding protein, partial [Promethearchaeota archaeon] diamond 78 43.9 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon
30242678 30242678 PRJNA758088_P_NODE_332952_length_245_cov_0.895349_g325981_i0 PRJNA758088 332952 245 0.895349 2.19360505 archaeon 1906665 Archaea Archaea 124 5.88e-32   NR RYG70026.1 1906665 g325981 i0 77.8 0.991836734693878 81 18 99.2 0 3 245 265 345 RYG70026.1 MAG: hypothetical protein EON64_01255 [archaeon] diamond 243 124 1 Archaea               archaeon
30653131 30653131 PRJNA758088_P_NODE_323913_length_246_cov_0.890173_g316942_i0 PRJNA758088 323913 246 0.890173 2.18982558 archaeon 1906665 Archaea Archaea 98.2 2.83e-22   NR RYH28565.1 1906665 g316942 i0 92.2 0.621951219512195 51 4 62.2 0 154 2 214 264 RYH28565.1 MAG: tetratricopeptide repeat protein [archaeon] diamond 153 98.2 1 Archaea               archaeon
30684767 30684767 PRJNA758088_P_NODE_316933_length_247_cov_0.885057_g309962_i0 PRJNA758088 316933 247 0.885057 2.18609079 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 165 7e-47   NR MCJ7637739.1 2169593 g309962 i0 98.8 5.90283400809717 81 1 98.4 0 3 245 380 460 MCJ7637739.1 VWA domain-containing protein [Nitrososphaeraceae archaeon] diamond 1458 165 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
30906258 30906258 PRJNA758088_P_NODE_361834_length_241_cov_0.916667_g354863_i0 PRJNA758088 361834 241 0.916667 2.20916747 archaeon 1906665 Archaea Archaea 123 1.7999999999999998e-33   NR MDP2438646.1 1906665 g354863 i0 77.2 1.9792531120332 79 18 98.3 0 241 5 75 153 MDP2438646.1 Rab family GTPase [archaeon] diamond 477 123 1 Archaea               archaeon
30969404 30969404 PRJNA758088_P_NODE_140554_length_355_cov_1.092199_g133583_i0 PRJNA758088 140554 355 1.092199 3.87730645 archaeon 1906665 Archaea Archaea 85.9 2.25e-17   NR RYH29451.1 1906665 g133583 i0 86.4 0.371830985915493 44 6 37.2 0 223 354 212 255 RYH29451.1 MAG: solute carrier family 25 protein [archaeon] diamond 132 85.9 1 Archaea               archaeon
31601775 31601775 PRJNA758088_P_NODE_86156_length_455_cov_1.206806_g79187_i0 PRJNA758088 86156 455 1.206806 5.4909673 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 47.8 0.005   NR HKO41141.1 2169593 g79187 i0 28.6 0.646153846153846 98 64 64.6 2 81 374 231 322 HKO41141.1 M28 family metallopeptidase [Nitrososphaeraceae archaeon] diamond 294 47.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
31822852 31822852 PRJNA758088_P_NODE_295637_length_249_cov_1.312500_g288666_i0 PRJNA758088 295637 249 1.3125 3.268125 archaeon 1906665 Archaea Archaea 145 3.51e-42   NR RYG66505.1 1906665 g288666 i0 84.1 1.97590361445783 82 13 98.8 0 248 3 19 100 RYG66505.1 MAG: acetyl-CoA C-acyltransferase, partial [archaeon] diamond 492 145 1 Archaea               archaeon
31854554 31854554 PRJNA758088_P_NODE_221837_length_286_cov_1.187793_g214866_i0 PRJNA758088 221837 286 1.187793 3.39708798 Nitrososphaera sp. 1971748 Archaea Archaea 132 1.7399999999999997e-35   NR MCY1154899.1 1971748 g214866 i0 97 1.40559440559441 67 2 70.3 0 86 286 1 67 MCY1154899.1 nadA [Nitrososphaera sp.] diamond 402 132 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
32361127 32361127 PRJNA758088_P_NODE_186879_length_311_cov_0.970588_g179908_i0 PRJNA758088 186879 311 0.970588 3.01852868 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 72.8 2.23e-12   NR MDW3615091.1 2169593 g179908 i0 35.6 3.02893890675241 104 66 99.4 1 3 311 284 387 MDW3615091.1 reverse transcriptase family protein [Nitrososphaeraceae archaeon] diamond 942 72.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
32456022 32456022 PRJNA758088_P_NODE_246119_length_271_cov_1.166667_g239148_i0 PRJNA758088 246119 271 1.166667 3.16166757 archaeon 1906665 Archaea Archaea 143 5.48e-38   NR RYG65186.1 1906665 g239148 i0 81.1 0.996309963099631 90 16 99.6 1 2 271 442 530 RYG65186.1 MAG: hypothetical protein EON64_12455 [archaeon] diamond 270 143 1 Archaea               archaeon
32551060 32551060 PRJNA758088_P_NODE_350659_length_243_cov_0.905882_g343688_i0 PRJNA758088 350659 243 0.905882 2.20129326 archaeon 1906665 Archaea Archaea 84.7 4.45e-17   NR MDP2438644.1 1906665 g343688 i0 53.8 0.987654320987654 80 33 98.8 1 3 242 263 338 MDP2438644.1 hypothetical protein [archaeon] diamond 240 84.7 1 Archaea               archaeon
32623427 32623427 PRJNA758088_P_NODE_361520_length_241_cov_0.916667_g354549_i0 PRJNA758088 361520 241 0.916667 2.20916747 Thermoproteati 1783275 Archaea Archaea 121 3.38e-30   NR HJU33531.1 1971748 g354549 i0 86.8 4.23236514522822 68 9 84.6 0 239 36 432 499 HJU33531.1 tRNA guanosine(15) transglycosylase TgtA [Nitrososphaera sp.] diamond 1020 121 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
32834136 32834136 PRJNA758088_P_NODE_350480_length_243_cov_0.905882_g343509_i0 PRJNA758088 350480 243 0.905882 2.20129326 archaeon 1906665 Archaea Archaea 71.6 8.46e-13   NR MCQ2821138.1 1906665 g343509 i0 57.1 0.691358024691358 56 24 69.1 0 194 27 112 167 MCQ2821138.1 protein kinase [archaeon] diamond 168 71.6 1 Archaea               archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;