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contig_metadata

15 rows where analysis = "diamond", bioproject = "PRJNA758088" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 15 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA758088 · 15 ✖

analysis 1

  • diamond · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
737238 737238 PRJNA758088_P_NODE_314741_length_247_cov_0.885057_g307770_i0 PRJNA758088 314741 247 0.885057 2.18609079 Verrucomicrobiia bacterium Tous-C3TDCM 1982330 Bacteria Bacteria 152 1.62e-41   NR PAW62849.1 1982330 g307770 i0 97.5 2.95141700404858 81 2 98.4 0 245 3 329 409 PAW62849.1 MAG: type II secretion system protein E [Verrucomicrobiia bacterium Tous-C3TDCM] diamond 729 152 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium Tous-C3TDCM
7115644 7115644 PRJNA758088_P_NODE_289926_length_250_cov_0.870056_g282955_i0 PRJNA758088 289926 250 0.870056 2.17514 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 166 5.569999999999999e-46   NR HCG20217.1 2026799 g282955 i0 91.6 1.932 83 7 99.6 0 1 249 574 656 HCG20217.1 site-specific DNA-methyltransferase [Verrucomicrobiota bacterium] diamond 483 166 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
12216387 12216387 PRJNA758088_P_NODE_282770_length_251_cov_0.865169_g275799_i0 PRJNA758088 282770 251 0.865169 2.17157419 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 144 5.92e-38   NR HEX2747997.1 2026801 g275799 i0 83.1 0.99203187250996006 83 14 99.2 0 250 2 1036 1118 HEX2747997.1 alpha-2-macroglobulin family protein [Verrucomicrobiales bacterium] diamond 249 144 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
26609589 26609589 PRJNA758088_P_NODE_336021_length_244_cov_1.350877_g329050_i0 PRJNA758088 336021 244 1.350877 3.29613988 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 87.4 3.2e-18   NR MCX6905895.1 2026799 g329050 i0 57.5 3.9344262295082 80 29 98.4 2 244 5 179 253 MCX6905895.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 960 87.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
27337592 27337592 PRJNA758088_P_NODE_340483_length_244_cov_0.900585_g333512_i0 PRJNA758088 340483 244 0.900585 2.1974274 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 88.2 2.34e-18   NR MEY4487546.1 2026799 g333512 i0 53.8 0.983606557377049 80 37 98.4 0 1 240 255 334 MEY4487546.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 240 88.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28095273 28095273 PRJNA758088_P_NODE_349985_length_243_cov_0.905882_g343014_i0 PRJNA758088 349985 243 0.905882 2.20129326 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 91.7 6.78e-21   NR MEI6794832.1 2026799 g343014 i0 60.8 0.975308641975309 79 25 97.5 1 242 6 117 189 MEI6794832.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 237 91.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29295074 29295074 PRJNA758088_P_NODE_255649_length_265_cov_1.494792_g248678_i0 PRJNA758088 255649 265 1.494792 3.9611988 Prosthecobacter sp. 1965333 Bacteria Bacteria 83.2 9.2e-19   NR MCW0220631.1 1965333 g248678 i0 77.8 0.611320754716981 54 12 61.1 0 2 163 18 71 MCW0220631.1 hypothetical protein [Prosthecobacter sp.] diamond 162 83.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter sp.
29358315 29358315 PRJNA758088_P_NODE_268109_length_258_cov_1.221622_g261138_i0 PRJNA758088 268109 258 1.221622 3.15178476 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 102 3.929999999999999e-24   NR HXJ59741.1 2499141 g261138 i0 67.1 5.94186046511628 85 28 98.8 0 1 255 135 219 HXJ59741.1 pyrroline-5-carboxylate reductase [Verrucomicrobiia bacterium] diamond 1533 102 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
29578992 29578992 PRJNA758088_P_NODE_325450_length_246_cov_0.890173_g318479_i0 PRJNA758088 325450 246 0.890173 2.18982558 Prosthecobacter sp. 1965333 Bacteria Bacteria 127 3.98e-35   NR WP_300194736.1 1965333 g318479 i0 70.7 1 82 24 100 0 1 246 21 102 WP_300194736.1 metalloprotease family protein [Prosthecobacter sp.] diamond 246 127 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter sp.
29800177 29800177 PRJNA758088_P_NODE_354911_length_242_cov_0.911243_g347940_i0 PRJNA758088 354911 242 0.911243 2.20520806 Opitutales bacterium 2026772 Bacteria Bacteria 161 1.15e-46   NR MBP3525504.1 2026772 g347940 i0 100 0.991735537190083 80 0 99.2 0 240 1 180 259 MBP3525504.1 peptidylprolyl isomerase [Opitutales bacterium] diamond 240 161 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales     Opitutales bacterium
30432521 30432521 PRJNA758088_P_NODE_333333_length_245_cov_0.895349_g326362_i0 PRJNA758088 333333 245 0.895349 2.19360505 Coraliomargarita sp. CAG:312 1262865 Bacteria Bacteria 170 3.05e-48   NR CDE82941.1 1262865 g326362 i0 100 0.991836734693878 81 0 99.2 0 244 2 300 380 CDE82941.1 putative uncharacterized protein [Coraliomargarita sp. CAG:312] diamond 243 170 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Puniceicoccales Coraliomargaritaceae Coraliomargarita Coraliomargarita sp. CAG:312
31664698 31664698 PRJNA758088_P_NODE_215577_length_290_cov_1.276498_g208606_i0 PRJNA758088 215577 290 1.276498 3.7018442 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 52.8 1.11e-5   NR HLW35798.1 2201154 g208606 i0 40 0.724137931034483 70 38 71.4 2 289 83 89 155 HLW35798.1 GAF domain-containing protein [Chthoniobacterales bacterium] diamond 210 52.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
32424193 32424193 PRJNA758088_P_NODE_327479_length_245_cov_1.691860_g320508_i0 PRJNA758088 327479 245 1.69186 4.145057 Opitutales bacterium 2026772 Bacteria Bacteria 103 1.0099999999999999e-23   NR HTB63326.1 2026772 g320508 i0 56.1 1.00408163265306 82 35 99.2 1 244 2 236 317 HTB63326.1 hypothetical protein [Opitutales bacterium] diamond 246 103 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales     Opitutales bacterium
32676576 32676576 PRJNA758088_P_NODE_366160_length_241_cov_0.916667_g359189_i0 PRJNA758088 366160 241 0.916667 2.20916747 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 163 5.11e-49   NR MES2508139.1 2026799 g359189 i0 100 0.995850622406639 80 0 99.6 0 2 241 97 176 MES2508139.1 PEP-CTERM sorting domain-containing protein [Verrucomicrobiota bacterium] diamond 240 163 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32739857 32739857 PRJNA758088_P_NODE_323820_length_246_cov_0.890173_g316849_i0 PRJNA758088 323820 246 0.890173 2.18982558 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 145 1.48e-38   NR MES2469949.1 2026799 g316849 i0 88.9 0.98780487804878 81 9 98.8 0 245 3 185 265 MES2469949.1 DUF1592 domain-containing protein [Verrucomicrobiota bacterium] diamond 243 145 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;