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contig_metadata

13 rows where analysis = "diamond", bioproject = "PRJNA758088" and tax_phylum = "Oomycota"

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tax_superkingdom 1

tax_phylum 1

  • Oomycota · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA758088 · 13 ✖

analysis 1

  • diamond · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13489562 13489562 PRJNA758088_P_NODE_212291_length_292_cov_1.406393_g205320_i0 PRJNA758088 212291 292 1.406393 4.10666756 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 203 1.92e-64   NR XP_024584861.1 4781 g205320 i0 97.9 10.9623287671233 97 2 99.7 0 292 2 59 155 XP_024584861.1 adp-ribosylation factor [Plasmopara halstedii] diamond 3201 203 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
26799770 26799770 PRJNA758088_P_NODE_340041_length_244_cov_0.900585_g333070_i0 PRJNA758088 340041 244 0.900585 2.1974274 Thraustotheca clavata 74557 SAR_Eukaryotes SAR_Eukaryotes 50.4 1.7e-5   NR OQR92591.1 74557 g333070 i0 34.1 1.99180327868852 82 48 93.4 1 228 1 6 87 OQR92591.1 hypothetical protein THRCLA_08670, partial [Thraustotheca clavata] diamond 486 50.4 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
27062741 27062741 PRJNA758088_P_NODE_249322_length_269_cov_1.260204_g242351_i0 PRJNA758088 249322 269 1.260204 3.38994876 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 63.9 9.24e-10   NR XP_024576743.1 4781 g242351 i0 41.5 2.68773234200743 82 44 87 1 2 235 33 114 XP_024576743.1 Protein of unknown function DUF3661, vaculolar transmembrane [Plasmopara halstedii] diamond 723 64.3 0.993779160186625 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
28104917 28104917 PRJNA758088_P_NODE_210165_length_294_cov_1.040724_g203194_i0 PRJNA758088 210165 294 1.040724 3.05972856 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 82.8 2.19e-16   NR XP_067818556.1 4779 g203194 i0 46.5 7.07142857142857 99 51 99 1 292 2 139 237 XP_067818556.1 hypothetical protein CCR75_004917 [Bremia lactucae] diamond 2079 83.6 0.990430622009569 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Bremia Bremia lactucae
28168272 28168272 PRJNA758088_P_NODE_361245_length_241_cov_0.916667_g354274_i0 PRJNA758088 361245 241 0.916667 2.20916747 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 115 2.96e-28   NR DBA00640.1 4803 g354274 i0 61.7 11.0663900414938 81 30 99.6 1 1 240 194 274 DBA00640.1 TPA: hypothetical protein N0F65_003569 [Lagenidium giganteum] diamond 2667 116 0.991379310344828 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
28610318 28610318 PRJNA758088_P_NODE_320947_length_246_cov_0.890173_g313976_i0 PRJNA758088 320947 246 0.890173 2.18982558 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 75.9 8.11e-14   NR XP_024571954.1 4781 g313976 i0 64.3 6.86585365853659 56 20 68.3 0 170 3 393 448 XP_024571954.1 cmgc clk protein kinase [Plasmopara halstedii] diamond 1689 75.9 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
28821183 28821183 PRJNA758088_P_NODE_353768_length_242_cov_0.911243_g346797_i0 PRJNA758088 353768 242 0.911243 2.20520806 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 50.1 7.54e-5   NR KAH9127232.1 100861 g346797 i0 36.3 2.83884297520661 80 48 97.9 2 238 2 123 200 KAH9127232.1 hypothetical protein AeMF1_002449 [Aphanomyces euteiches] diamond 687 50.1 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
29452647 29452647 PRJNA758088_P_NODE_306870_length_248_cov_0.880000_g299899_i0 PRJNA758088 306870 248 0.88 2.1824 Lagenidium giganteum 4803 SAR_Eukaryotes SAR_Eukaryotes 127 2.91e-32   NR DAZ97989.1 4803 g299899 i0 77.2 1.91129032258065 79 18 95.6 0 239 3 204 282 DAZ97989.1 TPA: hypothetical protein N0F65_005147 [Lagenidium giganteum] diamond 474 127 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
30252536 30252536 PRJNA758088_P_NODE_237792_length_276_cov_1.275862_g230821_i0 PRJNA758088 237792 276 1.275862 3.52137912 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 62.8 1.28e-9   NR XP_008870975.1 157072 g230821 i0 41.4 2.82608695652174 87 49 94.6 2 268 8 96 180 XP_008870975.1 hypothetical protein H310_07366 [Aphanomyces invadans] diamond 780 63.2 0.993670886075949 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
31199793 31199793 PRJNA758088_P_NODE_38355_length_748_cov_1.554074_g32086_i0 PRJNA758088 38355 748 1.554074 11.62447352 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 128 2.8e-31   NR OQS00341.1 74557 g32086 i0 40.1 2.97192513368984 172 101 68.6 2 3 515 77 247 OQS00341.1 hypothetical protein THRCLA_06000 [Thraustotheca clavata] diamond 2223 129 0.992248062015504 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
31380324 31380324 PRJNA758088_P_NODE_300436_length_249_cov_0.875000_g293465_i0 PRJNA758088 300436 249 0.875 2.17875 [Pythium] brassicae (nom. inval.) 1485010 SAR_Eukaryotes SAR_Eukaryotes 72.4 4.8e-13   NR TYZ58174.1 1485010 g293465 i0 51.9 0.951807228915663 79 38 95.2 0 5 241 143 221 TYZ58174.1 hypothetical protein PybrP1_005726 [[Pythium] brassicae (nom. inval.)] diamond 237 72.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium [Pythium] brassicae (nom. inval.)
31927675 31927675 PRJNA758088_P_NODE_341577_length_244_cov_0.900585_g334606_i0 PRJNA758088 341577 244 0.900585 2.1974274 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 58.9 6.92e-8   NR ETI41766.1 1317065 g334606 i0 54.2 2.95081967213115 48 22 59 0 95 238 293 340 ETI41766.1 hypothetical protein F443_13025 [Phytophthora nicotianae P1569] diamond 720 58.9 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae
32834111 32834111 PRJNA758088_P_NODE_146320_length_348_cov_1.389091_g139349_i0 PRJNA758088 146320 348 1.389091 4.83403668 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 97.1 2.28e-21   NR XP_008867388.1 157072 g139349 i0 48.3 2.25 87 45 75 0 3 263 214 300 XP_008867388.1 hypothetical protein H310_04708 [Aphanomyces invadans] diamond 783 97.1 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;