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contig_metadata

17 rows where analysis = "diamond", bioproject = "PRJNA758088" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 17 ✖

tax_kingdom 1

bioproject 1

  • PRJNA758088 · 17 ✖

analysis 1

  • diamond · 17 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13490903 13490903 PRJNA758088_P_NODE_303891_length_248_cov_1.314286_g296920_i0 PRJNA758088 303891 248 1.314286 3.25942928 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 77.8 2.75e-16   NR CAA9234008.1 1672391 g296920 i0 50 0.991935483870968 82 41 99.2 0 3 248 13 94 CAA9234008.1 MAG: hypothetical protein AVDCRST_MAG93-1013 [uncultured Chloroflexia bacterium] diamond 246 77.8 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
26641425 26641425 PRJNA758088_P_NODE_307481_length_248_cov_0.880000_g300510_i0 PRJNA758088 307481 248 0.88 2.1824 Chloroflexota bacterium 2026724 Bacteria Bacteria 43.1 0.0279   NR MDQ3808761.1 2026724 g300510 i0 32.2 1.05241935483871 87 52 98 4 5 247 227 312 MDQ3808761.1 MFS transporter [Chloroflexota bacterium] diamond 261 43.1 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
26768144 26768144 PRJNA758088_P_NODE_324101_length_246_cov_0.890173_g317130_i0 PRJNA758088 324101 246 0.890173 2.18982558 Chloroflexota bacterium 2026724 Bacteria Bacteria 90.5 1.9e-20   NR RLC88692.1 2026724 g317130 i0 47.5 3.90243902439024 80 42 97.6 0 2 241 42 121 RLC88692.1 MAG: hypothetical protein DRJ03_02110 [Chloroflexota bacterium] diamond 960 90.5 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
27189058 27189058 PRJNA758088_P_NODE_355402_length_242_cov_0.911243_g348431_i0 PRJNA758088 355402 242 0.911243 2.20520806 Bacteria 2 Bacteria Bacteria 101 4.449999999999999e-23   NR MEL7626971.1 2024896 g348431 i0 67.1 2.92561983471074 76 25 94.2 0 3 230 60 135 MEL7626971.1 PBSX family phage terminase large subunit [Anaerolineaceae bacterium] diamond 708 102 0.990196078431373 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium
28032244 28032244 PRJNA758088_P_NODE_284625_length_251_cov_0.865169_g277654_i0 PRJNA758088 284625 251 0.865169 2.17157419 Anaerolineales bacterium 2073117 Bacteria Bacteria 66.6 1.44e-10   NR MFA5872768.1 2073117 g277654 i0 38.6 4.94820717131474 83 50 99.2 1 250 2 44 125 MFA5872768.1 UDP-N-acetylglucosamine 2-epimerase [Anaerolineales bacterium] diamond 1242 66.6 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
28126949 28126949 PRJNA758088_P_NODE_295045_length_249_cov_1.732955_g288074_i0 PRJNA758088 295045 249 1.732955 4.31505795 Anaerolineales bacterium 2073117 Bacteria Bacteria 46.6 0.00163   NR MCJ7677324.1 2073117 g288074 i0 36.4 0.795180722891566 66 34 69.9 2 209 36 143 208 MCJ7677324.1 flippase-like domain-containing protein [Anaerolineales bacterium] diamond 198 46.6 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
28189775 28189775 PRJNA758088_P_NODE_358046_length_242_cov_0.911243_g351075_i0 PRJNA758088 358046 242 0.911243 2.20520806 Chloroflexota bacterium 2026724 Bacteria Bacteria 86.3 3.3e-18   NR MBM4425290.1 2026724 g351075 i0 71.7 2.90082644628099 46 13 57 0 143 6 3 48 MBM4425290.1 site-specific DNA-methyltransferase [Chloroflexota bacterium] diamond 702 86.3 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
28632252 28632252 PRJNA758088_P_NODE_285767_length_251_cov_0.865169_g278796_i0 PRJNA758088 285767 251 0.865169 2.17157419 Anaerolineae bacterium 2052143 Bacteria Bacteria 42.7 0.0396   NR MFN8484828.1 2052143 g278796 i0 35.3 0.812749003984064 68 35 75.3 3 249 61 145 208 MFN8484828.1 glycosyltransferase [Anaerolineae bacterium] diamond 204 42.7 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
28915946 28915946 PRJNA758088_P_NODE_284528_length_251_cov_0.865169_g277557_i0 PRJNA758088 284528 251 0.865169 2.17157419 Chloroflexota bacterium 2026724 Bacteria Bacteria 120 1.87e-29   NR MEP7158197.1 2026724 g277557 i0 75.9 0.99203187250996006 83 20 99.2 0 251 3 100 182 MEP7158197.1 DUF11 domain-containing protein [Chloroflexota bacterium] diamond 249 120 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29042669 29042669 PRJNA758088_P_NODE_315328_length_247_cov_0.885057_g308357_i0 PRJNA758088 315328 247 0.885057 2.18609079 Chloroflexota bacterium 2026724 Bacteria Bacteria 42.4 0.0495   NR TMC19485.1 2026724 g308357 i0 40 0.607287449392713 50 26 60.7 1 68 217 219 264 TMC19485.1 MAG: hypothetical protein E6J34_15275 [Chloroflexota bacterium] diamond 150 42.4 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29736900 29736900 PRJNA758088_P_NODE_312590_length_247_cov_0.885057_g305619_i0 PRJNA758088 312590 247 0.885057 2.18609079 Kouleothrix aurantiaca 186479 Bacteria Bacteria 57.4 7.13e-8   NR KPV52449.1 186479 g305619 i0 39.2 0.959514170040486 79 48 96 0 2 238 41 119 KPV52449.1 hypothetical protein SE17_15440 [Kouleothrix aurantiaca] diamond 237 57.4 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Roseiflexaceae Kouleothrix Kouleothrix aurantiaca
29926766 29926766 PRJNA758088_P_NODE_324191_length_246_cov_0.890173_g317220_i0 PRJNA758088 324191 246 0.890173 2.18982558 Anaerolineales bacterium 2073117 Bacteria Bacteria 48.1 3.94e-4   NR MBV6393836.1 2073117 g317220 i0 46.9 0.597560975609756 49 23 59.8 1 243 97 80 125 MBV6393836.1 hypothetical protein [Anaerolineales bacterium] diamond 147 48.1 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
30369420 30369420 PRJNA758088_P_NODE_366792_length_241_cov_0.916667_g359821_i0 PRJNA758088 366792 241 0.916667 2.20916747 Chloroflexota bacterium 2026724 Bacteria Bacteria 152 1.8699999999999998e-42   NR RLT21584.1 2026724 g359821 i0 98.8 0.995850622406639 80 1 99.6 0 241 2 139 218 RLT21584.1 MAG: 3-phosphoshikimate 1-carboxyvinyltransferase [Chloroflexota bacterium] diamond 240 152 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31032723 31032723 PRJNA758088_P_NODE_312595_length_247_cov_0.885057_g305624_i0 PRJNA758088 312595 247 0.885057 2.18609079 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 78.2 1.31e-14   NR RJQ07450.1 2026734 g305624 i0 62.1 0.704453441295547 58 22 70.4 0 178 5 15 72 RJQ07450.1 MAG: type I DNA topoisomerase, partial [Dehalococcoidia bacterium] diamond 174 78.2 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
31664731 31664731 PRJNA758088_P_NODE_349777_length_243_cov_0.905882_g342806_i0 PRJNA758088 349777 243 0.905882 2.20129326 Anaerolineae bacterium 2052143 Bacteria Bacteria 140 3.25e-39   NR NJM41390.1 2052143 g342806 i0 82.5 0.987654320987654 80 14 98.8 0 241 2 24 103 NJM41390.1 phytanoyl-CoA dioxygenase family protein [Anaerolineae bacterium] diamond 240 140 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
32202723 32202723 PRJNA758088_P_NODE_293998_length_250_cov_0.870056_g287027_i0 PRJNA758088 293998 250 0.870056 2.17514 Anaerolineales bacterium 2073117 Bacteria Bacteria 135 9.779999999999996e-35   NR HEX5943821.1 2073117 g287027 i0 80.5 0.984 82 16 98.4 0 248 3 863 944 HEX5943821.1 AAA family ATPase [Anaerolineales bacterium] diamond 246 135 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
32275989 32275989 PRJNA758088_P_NODE_342318_length_244_cov_0.900585_g335347_i0 PRJNA758088 342318 244 0.900585 2.1974274 Bacillati 1783272 Bacteria Bacteria 136 2.6499999999999996e-37   NR MEX2184102.1 2026724 g335347 i0 90.1 3.98360655737705 81 8 99.6 0 243 1 168 248 MEX2184102.1 bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase [Chloroflexota bacterium] diamond 972 136 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;