RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA758088" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA758088 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28095258 28095258 PRJNA758088_P_NODE_298485_length_249_cov_0.875000_g291514_i0 PRJNA758088 298485 249 0.875 2.17875 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 43.9 0.0149   NR MES1912058.1 1215613 g291514 i0 34.8 0.831325301204819 69 40 83.1 1 18 224 99 162 MES1912058.1 hypothetical protein [Cercozoa sp. M6MM] diamond 207 43.9 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
31759713 31759713 PRJNA758088_P_NODE_290257_length_250_cov_0.870056_g283286_i0 PRJNA758088 290257 250 0.870056 2.17514 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 65.9 1.66e-10   NR MES1917315.1 1215613 g283286 i0 38.8 0.96 80 48 94.8 1 10 246 136 215 MES1917315.1 hypothetical protein [Cercozoa sp. M6MM] diamond 240 65.9 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;