RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

22 rows where analysis = "diamond", bioproject = "PRJNA758088" and tax_clade = "Discoba"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 22 ✖

bioproject 1

  • PRJNA758088 · 22 ✖

analysis 1

  • diamond · 22 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8389848 8389848 PRJNA758088_P_NODE_266147_length_259_cov_1.241935_g259176_i0 PRJNA758088 266147 259 1.241935 3.21661165 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 147 6.969999999999998e-42   NR QLA09599.1 3039 g259176 i0 72.1 46.8069498069498 86 24 99.6 0 2 259 128 213 QLA09599.1 60S large subunit ribosomal protein uL2 [Euglena gracilis] diamond 12123 147 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
10939600 10939600 PRJNA758088_P_NODE_201009_length_300_cov_1.339207_g194038_i0 PRJNA758088 201009 300 1.339207 4.017621 Euglena gracilis 3039 Euglenozoa other_Eukaryota 130 1.13e-35   NR QLA09603.1 3039 g194038 i0 63.5 0.96 96 33 96 2 13 300 53 146 QLA09603.1 60S large subunit ribosomal protein uL6 [Euglena gracilis] diamond 288 130 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
13957670 13957670 PRJNA758088_P_NODE_299571_length_249_cov_0.875000_g292600_i0 PRJNA758088 299571 249 0.875 2.17875 Perkinsela sp. CCAP 156 1935466 Euglenozoa other_Eukaryota 56.6 6.18e-8   NR KNH08079.1 1314962 g292600 i0 51 1.33734939759036 49 24 59 0 217 71 73 121 KNH08079.1 diphthine synthase-like protein [Perkinsela sp. CCAP 1560/4] diamond 333 56.6 1 Eukaryota Discoba   Euglenozoa Kinetoplastea   Ichthyobodonidae Perkinsela Perkinsela sp. CCAP 1560/4
16506799 16506799 PRJNA758088_P_NODE_369793_length_227_cov_2.350649_g362822_i0 PRJNA758088 369793 227 2.350649 5.33597323 Euglena gracilis 3039 Euglenozoa other_Eukaryota 97.8 1.2300000000000002e-21   NR WJH19499.1 3039 g362822 i0 68.1 0.911894273127753 69 22 91.2 0 208 2 530 598 WJH19499.1 Heat shock 70 kDa protein [Euglena gracilis] diamond 207 97.8 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
18586019 18586019 PRJNA758088_P_NODE_110695_length_398_cov_1.646154_g103725_i0 PRJNA758088 110695 398 1.646154 6.55169292 Euglena gracilis 3039 Euglenozoa other_Eukaryota 125 6.49e-32   NR QLA09604.1 3039 g103725 i0 55.1 0.806532663316583 107 48 80.7 0 397 77 200 306 QLA09604.1 60S large subunit ribosomal protein uL10 [Euglena gracilis] diamond 321 125 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
24964486 24964486 PRJNA758088_P_NODE_359140_length_242_cov_0.905325_g352169_i0 PRJNA758088 359140 242 0.905325 2.1908865 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 147 1.29e-40   NR EKG04192.1 5693 g352169 i0 88.8 100.165289256198 80 9 99.2 0 3 242 172 251 EKG04192.1 proteasome regulatory ATPase subunit 2, putative [Trypanosoma cruzi] diamond 24240 147 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
26799749 26799749 PRJNA758088_P_NODE_268701_length_257_cov_1.847826_g261730_i0 PRJNA758088 268701 257 1.847826 4.74891282 Euglena gracilis 3039 Euglenozoa other_Eukaryota 123 6.06e-34   NR QLA09614.1 3039 g261730 i0 74.4 0.910505836575875 78 20 91.1 0 2 235 46 123 QLA09614.1 60S large subunit ribosomal protein uL24 [Euglena gracilis] diamond 234 123 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
26926427 26926427 PRJNA758088_P_NODE_255542_length_265_cov_1.588542_g248571_i0 PRJNA758088 255542 265 1.588542 4.2096363 Bodo saltans 75058 Euglenozoa other_Eukaryota 87.4 6.72e-20   NR CUG87337.1 75058 g248571 i0 68.9 0.837735849056604 74 23 83.8 0 3 224 52 125 CUG87337.1 60S ribosomal protein L24e, putative [Bodo saltans] diamond 222 87.4 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
26936154 26936154 PRJNA758088_P_NODE_327522_length_245_cov_1.645349_g320551_i0 PRJNA758088 327522 245 1.645349 4.03110505 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 77 3.84e-15   NR EPY28527.1 28005 g320551 i0 45.1 2.00816326530612 82 35 99.2 2 1 243 84 156 EPY28527.1 20S proteasome subunit beta 4 [Strigomonas culicis] diamond 492 77.4 0.994832041343669 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Strigomonas Strigomonas culicis
28325930 28325930 PRJNA758088_P_NODE_175426_length_320_cov_1.417004_g168455_i0 PRJNA758088 175426 320 1.417004 4.5344128 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 71.6 1.02e-13   NR QLA09588.1 3039 g168455 i0 60 1.05 55 22 51.6 0 22 186 20 74 QLA09588.1 40S small subunit ribosomal protein eS21 [Euglena gracilis] diamond 336 71.6 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
28484019 28484019 PRJNA758088_P_NODE_237766_length_276_cov_1.305419_g230795_i0 PRJNA758088 237766 276 1.305419 3.60295644 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 120 1.08e-29   NR XP_002682064.1 5762 g230795 i0 62 3 92 35 100 0 1 276 198 289 XP_002682064.1 ammonium transporter AmtA [Naegleria gruberi] diamond 828 120 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
29074257 29074257 PRJNA758088_P_NODE_103288_length_412_cov_4.926254_g96318_i0 PRJNA758088 103288 412 4.926254 20.29616648 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 75.9 5.91e-15   NR XP_044563804.1 5763 g96318 i0 47.5 0.58252427184466 80 42 58.3 0 128 367 12 91 XP_044563804.1 uncharacterized protein FDP41_002161 [Naegleria fowleri] diamond 240 75.9 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
29137498 29137498 PRJNA758088_P_NODE_85589_length_456_cov_3.441253_g78620_i0 PRJNA758088 85589 456 3.441253 15.69211368 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 126 1.9e-34   NR KAJ9469984.1 91374 g78620 i0 55.3 1.46710526315789 114 46 71.7 2 39 365 1 114 KAJ9469984.1 hypothetical protein DIPPA_35953 [Diplonema papillatum] diamond 669 126 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
29232068 29232068 PRJNA758088_P_NODE_345849_length_243_cov_0.905882_g338878_i0 PRJNA758088 345849 243 0.905882 2.20129326 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 55.1 1.62e-6   NR KAJ9466032.1 91374 g338878 i0 80 1.12345679012346 30 6 37 0 3 92 499 528 KAJ9466032.1 Protein HOS4 [Diplonema papillatum] diamond 273 55.1 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
29326562 29326562 PRJNA758088_P_NODE_300389_length_249_cov_0.875000_g293418_i0 PRJNA758088 300389 249 0.875 2.17875 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 77.8 1.37e-14   NR XP_028886582.1 67003 g293418 i0 50 2.69879518072289 76 38 91.6 0 18 245 111 186 XP_028886582.1 putative aminopeptidase, putative,metallo-peptidase, Clan MG, Family M24 [Trypanosoma theileri] diamond 672 77.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
29651793 29651793 PRJNA758088_P_NODE_330890_length_245_cov_0.895349_g323919_i0 PRJNA758088 330890 245 0.895349 2.19360505 Trypanosoma 5690 Euglenozoa other_Eukaryota 70.9 2.59e-12   NR XP_067079027.1 5694 g323919 i0 42.7 2.75510204081633 75 42 90.6 1 224 3 200 274 XP_067079027.1 uncharacterized protein TEOVI_000609500 [Trypanosoma equiperdum] diamond 675 70.9 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma equiperdum
29683441 29683441 PRJNA758088_P_NODE_281790_length_251_cov_0.865169_g274819_i0 PRJNA758088 281790 251 0.865169 2.17157419 Naegleria 5761 Heterolobosea other_Eukaryota 108 2.86e-28   NR XP_002676892.1 5762 g274819 i0 61.4 3.95617529880478 83 32 99.2 0 3 251 55 137 XP_002676892.1 uncharacterized protein NAEGRDRAFT_33801, partial [Naegleria gruberi] diamond 993 108 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
30094201 30094201 PRJNA758088_P_NODE_283392_length_251_cov_0.865169_g276421_i0 PRJNA758088 283392 251 0.865169 2.17157419 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 78.2 3.06e-15   NR QLA09579.1 3039 g276421 i0 62.1 5.56972111553785 66 24 77.7 1 56 250 1 66 QLA09579.1 40S small subunit ribosomal protein eS1 [Euglena gracilis] diamond 1398 78.2 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
31633169 31633169 PRJNA758088_P_NODE_340396_length_244_cov_0.900585_g333425_i0 PRJNA758088 340396 244 0.900585 2.1974274 Bodo saltans 75058 Euglenozoa other_Eukaryota 102 2.7499999999999995e-23   NR CUI11444.1 75058 g333425 i0 64.5 1.86885245901639 76 27 93.4 0 15 242 104 179 CUI11444.1 inositol 1,4,5-trisphosphate/ryanodine receptor, putative, partial [Bodo saltans] diamond 456 102 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
31854558 31854558 PRJNA758088_P_NODE_246937_length_270_cov_1.964467_g239966_i0 PRJNA758088 246937 270 1.964467 5.3040609 Acrasis kona 1008807 Heterolobosea other_Eukaryota 115 5.12e-30   NR KAL0476827.1 1008807 g239966 i0 81.4 0.777777777777778 70 13 77.8 0 214 5 1 70 KAL0476827.1 ribosomal protein S7 [Acrasis kona] diamond 210 115 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
32012854 32012854 PRJNA758088_P_NODE_260798_length_262_cov_1.343915_g253827_i0 PRJNA758088 260798 262 1.343915 3.5210573 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 94.7 1.64e-20   NR XP_044545782.1 51637 g253827 i0 53.7 0.938931297709924 82 38 93.9 0 3 248 169 250 XP_044545782.1 uncharacterized protein C9374_008159 [Naegleria lovaniensis] diamond 246 94.7 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
32708173 32708173 PRJNA758088_P_NODE_153480_length_340_cov_1.985019_g146509_i0 PRJNA758088 153480 340 1.985019 6.7490646 Euglena gracilis 3039 Euglenozoa other_Eukaryota 102 2.65e-25   NR QLA09590.1 3039 g146509 i0 60.7 0.785294117647059 89 34 77.6 1 25 288 29 117 QLA09590.1 40S small subunit ribosomal protein eS25 [Euglena gracilis] diamond 267 102 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;