RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA758087" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 2 ✖

bioproject 1

  • PRJNA758087 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7112019 7112019 PRJNA758087_P_NODE_22946_length_545_cov_38.608051_g21629_i0 PRJNA758087 22946 545 38.608051 210.41387795 Botourmiaviridae sp. 2808997 Viruses Viruses 245 2.09e-74   NR WAK77987.1 2808997 g21629 i0 71.6 2.77981651376147 169 46 91.9 1 37 537 414 582 WAK77987.1 MAG: hypothetical protein [Botourmiaviridae sp.] diamond 1515 245 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Botourmiaviridae sp.
28568798 28568798 PRJNA758087_P_NODE_14467_length_787_cov_6.567227_g13250_i0 PRJNA758087 14467 787 6.567227 51.68407649 Phytophthora cactorum alphaendornavirus 4 3367732 Viruses Viruses 67 2e-8   NR BFT85754.1 3367732 g13250 i0 26.9 0.693773824650572 182 128 68.2 4 106 642 2040 2219 BFT85754.1 polyprotein [Phytophthora cactorum alphaendornavirus 4] diamond 546 67 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae Alphaendornavirus Phytophthora cactorum alphaendornavirus 4

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;