RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA758087" and tax_kingdom = "Heunggongvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Heunggongvirae · 3 ✖

bioproject 1

  • PRJNA758087 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18584898 18584898 PRJNA758087_P_NODE_15195_length_760_cov_3.576419_g13956_i0 PRJNA758087 15195 760 3.576419 27.1807844 Caudoviricetes sp. 2832643 Viruses Viruses 171 2.5299999999999998e-48   NR DAN81456.1 2832643 g13956 i0 53.5 0.627631578947368 159 73 62.4 1 564 91 1 159 DAN81456.1 MAG TPA: HIRAN domain [Caudoviricetes sp.] diamond 477 171 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
24960050 24960050 PRJNA758087_P_NODE_30480_length_403_cov_3.518182_g29160_i0 PRJNA758087 30480 403 3.518182 14.17827346 Xanthomonas phage XbC2 2978503 Viruses Viruses 94.4 2.52e-22   NR UYE98832.1 2978503 g29160 i0 56.5 1.27295285359801 85 37 63.3 0 398 144 2 86 UYE98832.1 hypothetical protein XbC2_407 [Xanthomonas phage XbC2] diamond 513 94.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Mimasvirus Xanthomonas phage XbC2
28947996 28947996 PRJNA758087_P_NODE_42248_length_248_cov_0.880000_g40928_i0 PRJNA758087 42248 248 0.88 2.1824 uncultured Caudovirales phage 2100421 Viruses Viruses 103 1.1499999999999999e-23   NR CAB4146517.1 2100421 g40928 i0 61 0.991935483870968 82 30 99.2 1 248 3 677 756 CAB4146517.1 Prim_Pol domain containing protein [uncultured Caudovirales phage] diamond 246 103 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Peduoviridae Maltschvirus Maltschvirus maltsch

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;