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contig_metadata

20 rows where analysis = "diamond", bioproject = "PRJNA757618" and tax_phylum = "Myxococcota"

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tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 20 ✖

tax_kingdom 1

bioproject 1

  • PRJNA757618 · 20 ✖

analysis 1

  • diamond · 20 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3283623 3283623 PRJNA757618_P_NODE_18103_length_285_cov_1.278302_g17051_i0 PRJNA757618 18103 285 1.278302 3.6431607 Polyangiaceae bacterium 2268199 Bacteria Bacteria 145 2.69e-39   NR HEX7665344.1 2268199 g17051 i0 76.6 4.94736842105263 94 18 98.9 1 283 2 147 236 HEX7665344.1 amidophosphoribosyltransferase [Polyangiaceae bacterium] diamond 1410 145 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
7111046 7111046 PRJNA757618_P_NODE_19646_length_278_cov_1.424390_g18594_i0 PRJNA757618 19646 278 1.42439 3.9598042 Polyangiaceae bacterium 2268199 Bacteria Bacteria 83.2 3.46e-16   NR HTQ44961.1 2268199 g18594 i0 45.1 1.6294964028777 82 44 88.5 1 31 276 655 735 HTQ44961.1 hypothetical protein [Polyangiaceae bacterium] diamond 453 83.2 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
10131227 10131227 PRJNA757618_P_NODE_46288_length_243_cov_0.905882_g45236_i0 PRJNA757618 46288 243 0.905882 2.20129326 Myxococcota bacterium 2818507 Bacteria Bacteria 137 2.55e-36   NR HEX5066081.1 2818507 g45236 i0 87.7 1 81 10 100 0 243 1 293 373 HEX5066081.1 amino acid permease [Myxococcota bacterium] diamond 243 137 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
16035391 16035391 PRJNA757618_P_NODE_46953_length_242_cov_0.923077_g45901_i0 PRJNA757618 46953 242 0.923077 2.23384634 Pseudomonadati 3379134 Bacteria Bacteria 143 3.71e-39   NR MDB4989328.1 2484252 g45901 i0 86.3 3.96694214876033 80 11 99.2 0 1 240 197 276 MDB4989328.1 Alanine racemase [Myxococcaceae bacterium] diamond 960 143 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae   Myxococcaceae bacterium
19859458 19859458 PRJNA757618_P_NODE_24596_length_259_cov_1.677419_g23544_i0 PRJNA757618 24596 259 1.677419 4.34451521 Nannocystaceae bacterium 2545255 Bacteria Bacteria 126 1.46e-33   NR HET6584870.1 2545255 g23544 i0 68.2 1.01930501930502 88 25 98.5 1 257 3 174 261 HET6584870.1 hypothetical protein [Nannocystaceae bacterium] diamond 264 126 1 Bacteria   Pseudomonadati Myxococcota   Nannocystales Nannocystaceae   Nannocystaceae bacterium
27147334 27147334 PRJNA757618_P_NODE_29942_length_251_cov_0.870787_g28890_i0 PRJNA757618 29942 251 0.870787 2.18567537 Byssovorax sp. 2927945 Bacteria Bacteria 63.9 1.4e-9   NR MEP7123274.1 2927945 g28890 i0 50.7 0.824701195219124 69 33 81.3 1 211 8 429 497 MEP7123274.1 serine/threonine-protein kinase [Byssovorax sp.] diamond 207 63.9 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Byssovorax Byssovorax sp.
27842470 27842470 PRJNA757618_P_NODE_26644_length_253_cov_0.866667_g25592_i0 PRJNA757618 26644 253 0.866667 2.19266751 Nannocystaceae bacterium 2545255 Bacteria Bacteria 88.6 3.49e-19   NR HET6584971.1 2545255 g25592 i0 54.7 0.889328063241107 75 34 88.9 0 1 225 175 249 HET6584971.1 hypothetical protein [Nannocystaceae bacterium] diamond 225 88.6 1 Bacteria   Pseudomonadati Myxococcota   Nannocystales Nannocystaceae   Nannocystaceae bacterium
28000734 28000734 PRJNA757618_P_NODE_28645_length_252_cov_0.865922_g27593_i0 PRJNA757618 28645 252 0.865922 2.18212344 Myxococcota bacterium 2818507 Bacteria Bacteria 68.2 2.82e-11   NR MDJ0867148.1 2818507 g27593 i0 69.6 0.952380952380952 46 14 54.8 0 139 2 7 52 MDJ0867148.1 alpha/beta fold hydrolase [Myxococcota bacterium] diamond 240 68.2 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
28158626 28158626 PRJNA757618_P_NODE_43645_length_244_cov_0.906433_g42593_i0 PRJNA757618 43645 244 0.906433 2.21169652 Chondromyces sp. 3069217 Bacteria Bacteria 84.7 6.29e-17   NR HSO21983.1 3069217 g42593 i0 46.2 1.93032786885246 78 42 95.9 0 8 241 25 102 HSO21983.1 AMP-binding protein [Chondromyces sp.] diamond 471 84.7 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Chondromyces Chondromyces sp.
28568781 28568781 PRJNA757618_P_NODE_17447_length_288_cov_1.344186_g16395_i0 PRJNA757618 17447 288 1.344186 3.87125568 Polyangiaceae bacterium 2268199 Bacteria Bacteria 87.8 9.07e-18   NR MEO7113229.1 2268199 g16395 i0 57.1 0.875 84 36 87.5 0 3 254 130 213 MEO7113229.1 PAS domain S-box protein [Polyangiaceae bacterium] diamond 252 87.8 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
28789726 28789726 PRJNA757618_P_NODE_43967_length_244_cov_0.906433_g42915_i0 PRJNA757618 43967 244 0.906433 2.21169652 Polyangiaceae bacterium 2268199 Bacteria Bacteria 73.2 5.12e-13   NR MEO8797313.1 2268199 g42915 i0 70.2 2.05327868852459 57 17 70.1 0 238 68 283 339 MEO8797313.1 PrsW family intramembrane metalloprotease [Polyangiaceae bacterium] diamond 501 73.2 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
28957775 28957775 PRJNA757618_P_NODE_30468_length_251_cov_0.865169_g29416_i0 PRJNA757618 30468 251 0.865169 2.17157419 Myxococcota 2818505 Bacteria Bacteria 156 3.21e-42   NR WP_136936148.1 889272 g29416 i0 85.5 12.8844621513944 83 12 99.2 0 250 2 397 479 WP_136936148.1 alpha-amylase family glycosyl hydrolase, partial [Polyangium fumosum] diamond 3234 157 0.993630573248408 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Polyangium Polyangium fumosum
29642053 29642053 PRJNA757618_P_NODE_35170_length_248_cov_0.891429_g34118_i0 PRJNA757618 35170 248 0.891429 2.21074392 Enhygromyxa salina 215803 Bacteria Bacteria 48.9 2.53e-4   NR WP_146660934.1 215803 g34118 i0 78.6 0.338709677419355 28 6 33.9 0 2 85 333 360 WP_146660934.1 hypothetical protein [Enhygromyxa salina] diamond 84 48.9 1 Bacteria   Pseudomonadati Myxococcota   Nannocystales Nannocystaceae Enhygromyxa Enhygromyxa salina
29863356 29863356 PRJNA757618_P_NODE_41051_length_245_cov_0.906977_g39999_i0 PRJNA757618 41051 245 0.906977 2.22209365 Polyangiaceae bacterium 2268199 Bacteria Bacteria 123 1.98e-30   NR HKY34627.1 2268199 g39999 i0 71.6 0.991836734693878 81 23 99.2 0 245 3 1378 1458 HKY34627.1 RHS repeat-associated core domain-containing protein [Polyangiaceae bacterium] diamond 243 123 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
29926735 29926735 PRJNA757618_P_NODE_44971_length_243_cov_0.917647_g43919_i0 PRJNA757618 44971 243 0.917647 2.22988221 Paraliomyxa miuraensis 376150 Bacteria Bacteria 131 4.98e-34   NR WP_266215323.1 376150 g43919 i0 71.3 2.96296296296296 80 23 98.8 0 241 2 226 305 WP_266215323.1 vWA domain-containing protein [Paraliomyxa miuraensis] diamond 720 131 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales   Paraliomyxa Paraliomyxa miuraensis
30937766 30937766 PRJNA757618_P_NODE_28794_length_252_cov_0.865922_g27742_i0 PRJNA757618 28794 252 0.865922 2.18212344 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 53.1 9.11e-6   NR MBS2016299.1 2026735 g27742 i0 41.9 0.880952380952381 74 43 88.1 0 19 240 168 241 MBS2016299.1 sigma 54-interacting transcriptional regulator [Deltaproteobacteria bacterium] diamond 222 53.1 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31443387 31443387 PRJNA757618_P_NODE_43816_length_244_cov_0.906433_g42764_i0 PRJNA757618 43816 244 0.906433 2.21169652 Polyangiaceae bacterium 2268199 Bacteria Bacteria 108 5.36e-26   NR MBK8257280.1 2268199 g42764 i0 66.3 1.95491803278689 80 27 98.4 0 241 2 86 165 MBK8257280.1 NADH:flavin oxidoreductase [Polyangiaceae bacterium] diamond 477 108 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
31959280 31959280 PRJNA757618_P_NODE_46197_length_243_cov_0.905882_g45145_i0 PRJNA757618 46197 243 0.905882 2.20129326 Myxococcia 32015 Bacteria Bacteria 132 8.64e-36   NR MFO0679721.1 2268199 g45145 i0 80 5.92592592592593 80 16 98.8 0 242 3 166 245 MFO0679721.1 prolipoprotein diacylglyceryl transferase [Polyangiaceae bacterium] diamond 1440 133 0.992481203007519 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
32180947 32180947 PRJNA757618_P_NODE_41098_length_245_cov_0.906977_g40046_i0 PRJNA757618 41098 245 0.906977 2.22209365 Bacteria 2 Bacteria Bacteria 100 9.67e-23   NR MCC6999212.1 2026735 g40046 i0 62.5 1.93469387755102 80 29 98 1 242 3 41 119 MCC6999212.1 DUF1552 domain-containing protein [Deltaproteobacteria bacterium] diamond 474 100 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32329544 32329544 PRJNA757618_P_NODE_42859_length_244_cov_0.912281_g41807_i0 PRJNA757618 42859 244 0.912281 2.22596564 Polyangiaceae bacterium 2268199 Bacteria Bacteria 67.8 5.46e-11   NR HEX2734568.1 2268199 g41807 i0 96.8 3.76229508196721 31 1 38.1 0 3 95 565 595 HEX2734568.1 hypothetical protein [Polyangiaceae bacterium] diamond 918 67.8 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;