RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA757618" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA757618 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28884513 28884513 PRJNA757618_P_NODE_37868_length_247_cov_0.890805_g36816_i0 PRJNA757618 37868 247 0.890805 2.20028835 Lobosporangium transversale 64571 Fungi Fungi 51.2 4.15e-5   NR XP_021883980.1 64571 g36816 i0 69.7 1.20242914979757 33 10 40.1 0 2 100 626 658 XP_021883980.1 molybdopterin binding aldehyde oxidase/xanthine dehydrogenase [Lobosporangium transversale] diamond 297 51.2 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Lobosporangium Lobosporangium transversale
28979476 28979476 PRJNA757618_P_NODE_42288_length_245_cov_0.883721_g41236_i0 PRJNA757618 42288 245 0.883721 2.16511645 Mycotypha africana 64632 Fungi Fungi 56.6 4.46e-7   NR XP_052934711.1 64632 g41236 i0 37.5 0.979591836734694 80 50 98 0 244 5 139 218 XP_052934711.1 uncharacterized protein BDF20DRAFT_877526 [Mycotypha africana] diamond 240 56.6 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mycotyphaceae Mycotypha Mycotypha africana
29304791 29304791 PRJNA757618_P_NODE_42849_length_244_cov_0.912281_g41797_i0 PRJNA757618 42849 244 0.912281 2.22596564 Mucoraceae 34489 Fungi Fungi 133 2.8499999999999995e-35   NR KAF1797721.1 29924 g41797 i0 79 3.89754098360656 81 17 99.6 0 243 1 67 147 KAF1797721.1 histidine phosphatase superfamily [Mucor lusitanicus] diamond 951 134 0.992537313432836 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor lusitanicus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;