RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA757618" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA757618 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30052820 30052820 PRJNA757618_P_NODE_31031_length_250_cov_0.881356_g29979_i0 PRJNA757618 31031 250 0.881356 2.20339 Minisyncoccota bacterium 2053589 Bacteria Bacteria 50.8 5.71e-5   NR MEZ0208739.1 2053589 g29979 i0 36.1 0.864 72 44 86.4 2 30 245 1106 1175 MEZ0208739.1 reverse transcriptase family protein [Candidatus Paceibacterota bacterium] diamond 216 50.8 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31959279 31959279 PRJNA757618_P_NODE_40837_length_245_cov_0.906977_g39785_i0 PRJNA757618 40837 245 0.906977 2.22209365 Pseudomonadati 3379134 Bacteria Bacteria 141 6.029999999999999e-38   NR HVX90168.1 2053589 g39785 i0 82.7 1.98367346938776 81 14 99.2 0 245 3 56 136 HVX90168.1 type II toxin-antitoxin system HipA family toxin [Candidatus Paceibacterota bacterium] diamond 486 142 0.992957746478873 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;