RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA757618" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJNA757618 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26989435 26989435 PRJNA757618_P_NODE_19922_length_277_cov_1.254902_g18870_i0 PRJNA757618 19922 277 1.254902 3.47607854 Dicistroviridae sp. 1955144 Viruses Viruses 68.6 4.58e-11   NR XCO48969.1 1955144 g18870 i0 34.1 0.985559566787004 91 59 97.5 1 275 6 20 110 XCO48969.1 MAG: putative ORF2 protein [Dicistroviridae sp.] diamond 273 68.6 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Dicistroviridae sp.
28474192 28474192 PRJNA757618_P_NODE_27446_length_252_cov_1.497207_g26394_i0 PRJNA757618 27446 252 1.497207 3.77296164 Vespula vulgaris Picorna-like virus 1 2874401 Viruses Viruses 68.2 4.57e-11   NR QZZ63311.1 2874401 g26394 i0 41.6 2.10714285714286 89 44 96.4 2 250 8 392 480 QZZ63311.1 hypothetical protein [Vespula vulgaris Picorna-like virus 1] diamond 531 68.2 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Vespula vulgaris Picorna-like virus 1
32739819 32739819 PRJNA757618_P_NODE_34620_length_248_cov_1.565714_g33568_i0 PRJNA757618 34620 248 1.565714 3.88297072 African cichlid piscichuvirus 3065075 Viruses Viruses 53.1 8.77e-6   NR YP_010840939.1 3065075 g33568 i0 46.2 0.786290322580645 65 34 77.4 1 3 194 15 79 YP_010840939.1 L protein [Hardyhead chuvirus] diamond 195 53.1 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus African cichlid piscichuvirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;