RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA756891" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA756891 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27779627 27779627 PRJNA756891_P_NODE_8204_length_303_cov_1.452174_g8135_i0 PRJNA756891 8204 303 1.452174 4.40008722 Minisyncoccota bacterium 2053589 Bacteria Bacteria 43.9 0.0214   NR HEV7702363.1 2053589 g8135 i0 41.5 1.32673267326733 65 38 64.4 0 13 207 33 97 HEV7702363.1 TMEM175 family protein [Candidatus Paceibacterota bacterium] diamond 402 43.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31411807 31411807 PRJNA756891_P_NODE_16516_length_241_cov_0.916667_g16447_i0 PRJNA756891 16516 241 0.916667 2.20916747 Minisyncoccota bacterium 2053589 Bacteria Bacteria 67 1.04e-10   NR MEZ0209070.1 2053589 g16447 i0 41.3 4.87966804979253 80 45 99.6 2 1 240 355 432 MEZ0209070.1 RNase H-like domain-containing protein [Candidatus Paceibacterota bacterium] diamond 1176 67 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;