contig_metadata
6 rows where analysis = "diamond", bioproject = "PRJNA756891" and tax_phylum = "Fornicata"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27115924 | 27115924 | PRJNA756891_P_NODE_3102_length_474_cov_1.344140_g3034_i0 | PRJNA756891 | 3102 | 474 | 1.34414 | 6.3712236 | Kipferlia bialata | 797122 | Fornicata | other_Eukaryota | 89.7 | 9.79e-18 | NR | GCA63523.1 | 797122 | g3034 | i0 | 37.7 | 0.955696202531646 | 151 | 85 | 89.9 | 4 | 470 | 45 | 90 | 240 | GCA63523.1 hypothetical protein KIPB_010413 [Kipferlia bialata] | diamond | 453 | 89.7 | 1 | Eukaryota | Metamonada | Fornicata | Kipferlia | Kipferlia bialata | |||||
| 27463853 | 27463853 | PRJNA756891_P_NODE_10443_length_271_cov_1.393939_g10374_i0 | PRJNA756891 | 10443 | 271 | 1.393939 | 3.77757469 | Carpediemonas membranifera | 201153 | Fornicata | other_Eukaryota | 71.2 | 5.09e-12 | NR | KAG9392317.1 | 201153 | g10374 | i0 | 40.7 | 1.79335793357934 | 86 | 51 | 95.2 | 0 | 2 | 259 | 433 | 518 | KAG9392317.1 Helicase conserved C-terminal domain [Carpediemonas membranifera] | diamond | 486 | 71.2 | 1 | Eukaryota | Metamonada | Fornicata | Carpediemonas | Carpediemonas membranifera | |||||
| 28095206 | 28095206 | PRJNA756891_P_NODE_7105_length_323_cov_1.232000_g7036_i0 | PRJNA756891 | 7105 | 323 | 1.232 | 3.97936 | Spironucleus salmonicida | 348837 | Fornicata | other_Eukaryota | 57 | 7.21e-7 | NR | XP_067768465.1 | 348837 | g7036 | i0 | 29 | 1.6625386996904 | 93 | 61 | 81.7 | 1 | 25 | 288 | 174 | 266 | XP_067768465.1 Ubiquitin carboxyl-terminal hydrolase family protein [Spironucleus salmonicida] | diamond | 537 | 57 | 1 | Eukaryota | Metamonada | Fornicata | Diplomonadida | Hexamitidae | Spironucleus | Spironucleus salmonicida | |||
| 29430896 | 29430896 | PRJNA756891_P_NODE_5089_length_375_cov_1.529801_g5020_i0 | PRJNA756891 | 5089 | 375 | 1.529801 | 5.73675375 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 48.5 | 0.00162 | NR | KAG9392170.1 | 201153 | g5020 | i0 | 43.8 | 2.36 | 48 | 26 | 38.4 | 1 | 371 | 228 | 3830 | 3876 | KAG9392170.1 FG-GAP repeat [Carpediemonas membranifera] | diamond | 885 | 48.5 | 1 | Eukaryota | Metamonada | Fornicata | Carpediemonas | Carpediemonas membranifera | |||||
| 30748063 | 30748063 | PRJNA756891_P_NODE_12194_length_251_cov_0.865169_g12125_i0 | PRJNA756891 | 12194 | 251 | 0.865169 | 2.17157419 | Kipferlia bialata | 797122 | Fornicata | other_Eukaryota | 53.5 | 6.31e-6 | NR | GIQ83745.1 | 797122 | g12125 | i0 | 37.7 | 0.824701195219124 | 69 | 38 | 82.5 | 1 | 229 | 23 | 308 | 371 | GIQ83745.1 translation Initiation factor eIF- 4e [Kipferlia bialata] | diamond | 207 | 53.5 | 1 | Eukaryota | Metamonada | Fornicata | Kipferlia | Kipferlia bialata | |||||
| 32843830 | 32843830 | PRJNA756891_P_NODE_11020_length_264_cov_1.209424_g10951_i0 | PRJNA756891 | 11020 | 264 | 1.209424 | 3.19287936 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 80.9 | 1.06e-15 | NR | KAG9396190.1 | 201153 | g10951 | i0 | 41.9 | 5.54545454545455 | 86 | 47 | 94.3 | 2 | 257 | 9 | 80 | 165 | KAG9396190.1 Deoxyribonuclease II [Carpediemonas membranifera] | diamond | 1464 | 80.9 | 1 | Eukaryota | Metamonada | Fornicata | Carpediemonas | Carpediemonas membranifera |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;