RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA753704" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA753704 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10130742 10130742 PRJNA753704_P_NODE_28208_length_242_cov_1.840237_g27847_i0 PRJNA753704 28208 242 1.840237 4.45337354 Opisthokonta 33154 Platyhelminthes Platyhelminthes 110 7.34e-26   NR VDP90137.1 27848 g27847 i0 62 34.3636363636364 79 30 97.9 0 3 239 354 432 VDP90137.1 unnamed protein product [Echinostoma caproni] diamond 8316 110 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Echinostomatidae Echinostoma Echinostoma caproni
27442303 27442303 PRJNA753704_P_NODE_27083_length_245_cov_0.906977_g26722_i0 PRJNA753704 27083 245 0.906977 2.22209365 Schistosoma 6181 Platyhelminthes Platyhelminthes 65.5 1.09e-10   NR XP_018646131.1 6183 g26722 i0 58.8 18.5632653061224 51 21 62.4 0 92 244 11 61 XP_018646131.1 rab15, 13, 10, 1, 35, 5, and, putative [Schistosoma mansoni] diamond 4548 65.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
32896889 32896889 PRJNA753704_P_NODE_14180_length_317_cov_2.266393_g13819_i0 PRJNA753704 14180 317 2.266393 7.18446581 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 126 3.1499999999999993e-34   NR PAA66860.1 282301 g13819 i0 57.3 1.94952681388013 103 43 96.5 1 2 307 68 170 PAA66860.1 hypothetical protein BOX15_Mlig024683g1 [Macrostomum lignano] diamond 618 126 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;