RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA753704" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA753704 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28610297 28610297 PRJNA753704_P_NODE_28027_length_243_cov_0.917647_g27666_i0 PRJNA753704 28027 243 0.917647 2.22988221 Pseudomonadati 3379134 Bacteria Bacteria 67.4 6.89e-11   NR MCF7805575.1 2026760 g27666 i0 50.8 2.19753086419753 61 30 75.3 0 2 184 314 374 MCF7805575.1 homocitrate synthase [Fidelibacterota bacterium] diamond 534 67.8 0.994100294985251 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
30179169 30179169 PRJNA753704_P_NODE_25632_length_248_cov_0.891429_g25271_i0 PRJNA753704 25632 248 0.891429 2.21074392 Fidelibacterota bacterium 2026760 Bacteria Bacteria 78.2 1.32e-14   NR MCJ7801104.1 2026760 g25271 i0 45.1 0.991935483870968 82 44 99.2 1 246 1 369 449 MCJ7801104.1 dynamin family protein [Fidelibacterota bacterium] diamond 246 78.2 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;