RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA753704" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA753704 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31158385 31158385 PRJNA753704_P_NODE_23575_length_253_cov_0.866667_g23214_i0 PRJNA753704 23575 253 0.866667 2.19266751 Chlamydiota bacterium 2081524 Bacteria Bacteria 108 1.84e-26   NR MCH9631726.1 2081524 g23214 i0 64.3 0.99604743083004 84 30 99.6 0 252 1 116 199 MCH9631726.1 Ribonuclease Z [Chlamydiota bacterium] diamond 252 108 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
32613697 32613697 PRJNA753704_P_NODE_27560_length_244_cov_0.912281_g27199_i0 PRJNA753704 27560 244 0.912281 2.22596564 Chlamydiota bacterium 2081524 Bacteria Bacteria 98.2 5.81e-22   NR MBM3194281.1 2081524 g27199 i0 58.8 0.983606557377049 80 33 98.4 0 241 2 292 371 MBM3194281.1 glycosyltransferase [Chlamydiota bacterium] diamond 240 98.2 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;