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contig_metadata

22 rows where analysis = "diamond", bioproject = "PRJNA753704" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 22 ✖

bioproject 1

  • PRJNA753704 · 22 ✖

analysis 1

  • diamond · 22 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18582944 18582944 PRJNA753704_P_NODE_24555_length_250_cov_2.514124_g24194_i0 PRJNA753704 24555 250 2.514124 6.28531 Patescibacteria group bacterium 2052139 Bacteria Bacteria 165 9.54e-46   NR MCL4419562.1 2052139 g24194 i0 97.6 0.996 83 2 99.6 0 249 1 227 309 MCL4419562.1 AAA family ATPase [Patescibacteria group bacterium] diamond 249 165 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
22408519 22408519 PRJNA753704_P_NODE_27938_length_243_cov_0.917647_g27577_i0 PRJNA753704 27938 243 0.917647 2.22988221 Patescibacteria group bacterium 2052139 Bacteria Bacteria 140 1.6e-37   NR HUD03719.1 2052139 g27577 i0 82.5 2.96296296296296 80 14 98.8 0 2 241 178 257 HUD03719.1 chromosomal replication initiator protein DnaA [Patescibacteria group bacterium] diamond 720 140 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
26714229 26714229 PRJNA753704_P_NODE_23881_length_252_cov_0.871508_g23520_i0 PRJNA753704 23881 252 0.871508 2.19620016 Bacteria 2 Bacteria Bacteria 141 6.189999999999999e-40   NR QQR64468.1 2030810 g23520 i0 78.6 2 84 18 100 0 1 252 131 214 QQR64468.1 MAG: HAD family phosphatase [Candidatus Kaiserbacteria bacterium] diamond 504 142 0.992957746478873 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium
26989390 26989390 PRJNA753704_P_NODE_5262_length_497_cov_1.655660_g4901_i0 PRJNA753704 5262 497 1.65566 8.2286302 Patescibacteria group bacterium 2052139 Bacteria Bacteria 182 1.08e-52   NR MCL4419852.1 2052139 g4901 i0 83.3 0.651911468812877 108 18 65.2 0 2 325 294 401 MCL4419852.1 CoA-acylating methylmalonate-semialdehyde dehydrogenase [Patescibacteria group bacterium] diamond 324 182 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
27432398 27432398 PRJNA753704_P_NODE_26503_length_246_cov_0.901734_g26142_i0 PRJNA753704 26503 246 0.901734 2.21826564 Minisyncoccota bacterium 2053589 Bacteria Bacteria 101 3.27e-26   NR MFO0719078.1 2053589 g26142 i0 75.4 0.792682926829268 65 16 79.3 0 195 1 1 65 MFO0719078.1 DUF167 domain-containing protein [Candidatus Paceibacterota bacterium] diamond 195 101 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27621732 27621732 PRJNA753704_P_NODE_25264_length_249_cov_0.886364_g24903_i0 PRJNA753704 25264 249 0.886364 2.20704636 Patescibacteria group bacterium 2052139 Bacteria Bacteria 78.2 5.19e-15   NR NQS88386.1 2052139 g24903 i0 59.6 1.46987951807229 57 23 68.7 0 177 7 23 79 NQS88386.1 hypothetical protein [Patescibacteria group bacterium] diamond 366 78.2 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
28032152 28032152 PRJNA753704_P_NODE_27545_length_244_cov_0.912281_g27184_i0 PRJNA753704 27545 244 0.912281 2.22596564 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 59.7 1.98e-8   NR RMD52393.1 2762014 g27184 i0 38.2 0.934426229508197 76 46 92.2 1 236 12 41 116 RMD52393.1 MAG: hypothetical protein D6827_00065 [Candidatus Parcubacteria bacterium] diamond 228 59.7 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
28095177 28095177 PRJNA753704_P_NODE_23425_length_253_cov_0.866667_g23064_i0 PRJNA753704 23425 253 0.866667 2.19266751 Patescibacteria group bacterium 2052139 Bacteria Bacteria 74.3 3.25e-13   NR MCL4419262.1 2052139 g23064 i0 50 0.972332015810277 82 32 86.6 2 2 220 672 753 MCL4419262.1 hypothetical protein [Patescibacteria group bacterium] diamond 246 74.3 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
28189677 28189677 PRJNA753704_P_NODE_17506_length_288_cov_2.516279_g17145_i0 PRJNA753704 17506 288 2.516279 7.24688352 Candidatus Aerophobetes bacterium 2030807 Bacteria Bacteria 75.1 2.75e-13   NR PCI94273.1 2030807 g17145 i0 55.4 1.32291666666667 65 29 67.7 0 195 1 286 350 PCI94273.1 MAG: polyribonucleotide nucleotidyltransferase [Candidatus Aerophobetes bacterium] diamond 381 75.1 1 Bacteria Bacteria candidate phyla   Candidatus Aerophobota         Candidatus Aerophobota bacterium
28252996 28252996 PRJNA753704_P_NODE_20446_length_269_cov_1.632653_g20085_i0 PRJNA753704 20446 269 1.632653 4.39183657 Candidatus Peribacteraceae bacterium 2735830 Bacteria Bacteria 53.9 5.68e-6   NR MBP9750954.1 2735830 g20085 i0 40.8 0.847583643122677 76 41 84.8 1 233 6 4 75 MBP9750954.1 S41 family peptidase [Candidatus Peribacteraceae bacterium] diamond 228 53.9 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria Candidatus Peribacterales     Candidatus Peribacteraceae bacterium
28632173 28632173 PRJNA753704_P_NODE_26467_length_246_cov_0.901734_g26106_i0 PRJNA753704 26467 246 0.901734 2.21826564 Candidatus Wolfebacteria bacterium GW2 2030812 Bacteria Bacteria 90.1 3.23e-19   NR KKR12165.1 1619013 g26106 i0 55.6 2.9390243902439 81 36 98.8 0 4 246 224 304 KKR12165.1 MAG: hypothetical protein UT41_C0003G0092 [Candidatus Wolfebacteria bacterium GW2011_GWC2_39_22] diamond 723 90.1 1 Bacteria Bacteria candidate phyla   Candidatus Wolfeibacteriota         Candidatus Wolfebacteria bacterium GW2011_GWC2_39_22
28821100 28821100 PRJNA753704_P_NODE_27468_length_244_cov_0.912281_g27107_i0 PRJNA753704 27468 244 0.912281 2.22596564 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 42.7 0.0375   NR MDD3862194.1 2044595 g27107 i0 30.1 1.02049180327869 83 44 88.5 2 16 231 305 384 MDD3862194.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 249 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
29200476 29200476 PRJNA753704_P_NODE_28209_length_242_cov_1.840237_g27848_i0 PRJNA753704 28209 242 1.840237 4.45337354 Candidatus Collierbacteria bacterium GW2 2053540 Bacteria Bacteria 64.7 1.91e-10   NR KKS94594.1 1618390 g27848 i0 71.1 0.471074380165289 38 11 47.1 0 127 240 3 40 KKS94594.1 MAG: Metallo-beta-lactamase family protein [Candidatus Collierbacteria bacterium GW2011_GWC2_43_12] diamond 114 64.7 1 Bacteria Bacteria candidate phyla   Candidatus Collieribacteriota         Candidatus Collierbacteria bacterium GW2011_GWC2_43_12
29484202 29484202 PRJNA753704_P_NODE_21910_length_261_cov_1.537234_g21549_i0 PRJNA753704 21910 261 1.537234 4.01218074 Minisyncoccota bacterium 2053589 Bacteria Bacteria 110 4.99e-26   NR MFA5387552.1 2053589 g21549 i0 60 1.94252873563218 85 34 97.7 0 5 259 355 439 MFA5387552.1 DUF5906 domain-containing protein [Candidatus Paceibacterota bacterium] diamond 507 110 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29673585 29673585 PRJNA753704_P_NODE_21370_length_264_cov_1.225131_g21009_i0 PRJNA753704 21370 264 1.225131 3.23434584 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 111 3.51e-28   NR MBI3629924.1 2053607 g21009 i0 65.1 1.88636363636364 83 28 93.2 1 260 15 140 222 MBI3629924.1 hypothetical protein [Candidatus Rokuibacteriota bacterium] diamond 498 111 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
30716294 30716294 PRJNA753704_P_NODE_16894_length_293_cov_1.413636_g16533_i0 PRJNA753704 16894 293 1.413636 4.14195348 Minisyncoccota bacterium 2053589 Bacteria Bacteria 43.9 0.0279   NR MCK9352242.1 2053589 g16533 i0 29.9 1.09556313993174 107 56 98.3 4 292 5 1013 1111 MCK9352242.1 DUF2341 domain-containing protein [Candidatus Paceibacterota bacterium] diamond 321 43.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31411789 31411789 PRJNA753704_P_NODE_28396_length_242_cov_0.923077_g28035_i0 PRJNA753704 28396 242 0.923077 2.23384634 Candidatus Saccharibacteria bacterium 32-49-12 1970479 Bacteria Bacteria 72.8 9.29e-13   NR OYX41104.1 1970479 g28035 i0 43.8 0.793388429752066 64 36 79.3 0 193 2 164 227 OYX41104.1 MAG: hypothetical protein B7Y94_05565 [Candidatus Saccharibacteria bacterium 32-49-12] diamond 192 72.8 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 32-49-12
31601679 31601679 PRJNA753704_P_NODE_25116_length_249_cov_1.267045_g24755_i0 PRJNA753704 25116 249 1.267045 3.15494205 Patescibacteria group bacterium 2052139 Bacteria Bacteria 95.5 1.08e-20   NR MCL4419262.1 2052139 g24755 i0 55.6 0.975903614457831 81 30 97.6 1 6 248 69 143 MCL4419262.1 hypothetical protein [Patescibacteria group bacterium] diamond 243 95.5 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
31791101 31791101 PRJNA753704_P_NODE_27417_length_244_cov_0.912281_g27056_i0 PRJNA753704 27417 244 0.912281 2.22596564 Candidatus Babelota bacterium 2030827 Bacteria Bacteria 73.2 7.04e-13   NR MBP7654848.1 2030827 g27056 i0 57.9 0.700819672131147 57 24 70.1 0 2 172 86 142 MBP7654848.1 hypothetical protein [Candidatus Dependentiae bacterium] diamond 171 73.2 1 Bacteria Bacteria candidate phyla             Candidatus Babelota bacterium
31822759 31822759 PRJNA753704_P_NODE_24757_length_250_cov_0.881356_g24396_i0 PRJNA753704 24757 250 0.881356 2.20339 Candidatus Peribacteraceae bacterium 2735830 Bacteria Bacteria 130 3.77e-34   NR MBP9750653.1 2735830 g24396 i0 77.1 0.996 83 18 99.6 1 249 1 3 84 MBP9750653.1 S-layer homology domain-containing protein [Candidatus Peribacteraceae bacterium] diamond 249 130 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria Candidatus Peribacterales     Candidatus Peribacteraceae bacterium
32487549 32487549 PRJNA753704_P_NODE_28899_length_239_cov_2.144578_g28538_i0 PRJNA753704 28899 239 2.144578 5.12554142 Patescibacteria group bacterium 2052139 Bacteria Bacteria 110 5.98e-26   NR MCL4419431.1 2052139 g28538 i0 88.1 0.740585774058577 59 6 72.8 1 2 175 529 587 MCL4419431.1 hypothetical protein [Patescibacteria group bacterium] diamond 177 110 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
32519271 32519271 PRJNA753704_P_NODE_24279_length_251_cov_0.876404_g23918_i0 PRJNA753704 24279 251 0.876404 2.19977404 Patescibacteria group bacterium 2052139 Bacteria Bacteria 42.7 0.0428   NR MFA5128081.1 2052139 g23918 i0 36.7 0.717131474103586 60 38 71.7 0 39 218 1105 1164 MFA5128081.1 tail fiber domain-containing protein [Patescibacteria group bacterium] diamond 180 42.7 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;