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contig_metadata

35 rows where analysis = "diamond", bioproject = "PRJNA753151" and tax_phylum = "Chordata"

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tax_superkingdom 1

tax_phylum 1

  • Chordata · 35 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA753151 · 35 ✖

analysis 1

  • diamond · 35 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20328362 20328362 PRJNA753151_S_NODE_279576_length_167_cov_2.177419_g277286_i0 PRJNA753151 279576 167 2.177419 3.63628973 Ovis ammon polii x Ovis aries 2918886 Chordata Chordata 58.5 3.55e-8   NR KAI4571112.1 2918886 g277286 i0 92.9 0.502994011976048 28 2 50.3 0 56 139 1258 1285 KAI4571112.1 hypothetical protein MJG53_013218 [Ovis ammon polii x Ovis aries] diamond 84 58.5 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis ammon polii x Ovis aries
27021278 27021278 PRJNA753151_S_NODE_217522_length_195_cov_1.460526_g215232_i0 PRJNA753151 217522 195 1.460526 2.8480257 Mirounga leonina 9715 Chordata Chordata 124 6.91e-33   NR XP_034875278.1 9715 g215232 i0 100 6.35384615384615 59 0 90.8 0 194 18 229 287 XP_034875278.1 TMF-regulated nuclear protein 1 [Mirounga leonina] diamond 1239 124 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Phocidae Mirounga Mirounga leonina
27052988 27052988 PRJNA753151_S_NODE_300362_length_160_cov_1.153846_g298072_i0 PRJNA753151 300362 160 1.153846 1.8461536 Rattus norvegicus 10116 Chordata Chordata 49.3 5.94e-5   NR XP_038952177.1 10116 g298072 i0 93.5 1.1625 31 2 58.1 0 93 1 82 112 XP_038952177.1 ran-binding protein 9 isoform X1 [Rattus norvegicus] diamond 186 49.3 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Rattus Rattus norvegicus
27147271 27147271 PRJNA753151_S_NODE_152862_length_235_cov_1.875000_g150572_i0 PRJNA753151 152862 235 1.875 4.40625 Ovis aries 9940 Chordata Chordata 55.1 1.55e-6   NR XP_060250614.1 9940 g150572 i0 40 2.48936170212766 65 36 79.1 1 22 207 994 1058 XP_060250614.1 ATP-binding cassette sub-family C member 4-like isoform X25 [Ovis aries] diamond 585 55.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
27495345 27495345 PRJNA753151_S_NODE_119363_length_263_cov_1.704545_g117073_i0 PRJNA753151 119363 263 1.704545 4.48295335 Manis pentadactyla 143292 Chordata Chordata 83.2 2.48e-16   NR KAI5255986.1 143292 g117073 i0 73.8 0.741444866920152 65 10 74.1 1 1 195 152 209 KAI5255986.1 Triple Functional Domain Protein [Manis pentadactyla] diamond 195 83.2 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Pholidota Manidae Manis Manis pentadactyla
27526826 27526826 PRJNA753151_S_NODE_141163_length_244_cov_2.014925_g138873_i0 PRJNA753151 141163 244 2.014925 4.916417 Cervus canadensis 1574408 Chordata Chordata 46.2 0.00221   NR XP_043341758.1 1574408 g138873 i0 47.5 0.75 61 22 75 1 29 211 347 397 XP_043341758.1 basic proline-rich protein-like [Cervus canadensis] diamond 183 46.2 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Cervus Cervus canadensis
27748105 27748105 PRJNA753151_S_NODE_241484_length_183_cov_1.607143_g239194_i0 PRJNA753151 241484 183 1.607143 2.94107169 Polypterus senegalus 55291 Chordata Chordata 65.1 1.85e-10   NR KAG2457475.1 55291 g239194 i0 58 1.63934426229508 50 21 82 0 33 182 151 200 KAG2457475.1 TCB1 transposase, partial [Polypterus senegalus] diamond 300 65.5 0.993893129770992 Eukaryota Opisthokonta Metazoa Chordata Cladistia Polypteriformes Polypteridae Polypterus Polypterus senegalus
27779583 27779583 PRJNA753151_S_NODE_181884_length_215_cov_2.168605_g179594_i0 PRJNA753151 181884 215 2.168605 4.66250075 Myotis lucifugus 59463 Chordata Chordata 42.7 0.0248   NR XP_014317927.1 59463 g179594 i0 39.5 0.6 43 26 60 0 1 129 240 282 XP_014317927.1 WD repeat and SOCS box-containing protein 2 [Myotis lucifugus] diamond 129 42.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Vespertilionidae Myotis Myotis lucifugus
27905469 27905469 PRJNA753151_S_NODE_213165_length_197_cov_2.045455_g210875_i0 PRJNA753151 213165 197 2.045455 4.02954635 Ovis aries 9940 Chordata Chordata 92 8.8e-20   NR XDA84352.1 9940 g210875 i0 87.8 0.746192893401015 49 6 74.6 0 49 195 362 410 XDA84352.1 hypothetical protein R6Z07_014415 [Ovis aries] diamond 147 92 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
27947217 27947217 PRJNA753151_S_NODE_305545_length_158_cov_1.565217_g303255_i0 PRJNA753151 305545 158 1.565217 2.47304286 Ovis 9935 Chordata Chordata 54.3 5.14e-7   NR KAG5200284.1 9940 g303255 i0 89.3 1.06329113924051 28 3 53.2 0 21 104 17 44 KAG5200284.1 hypothetical protein JEQ12_004818 [Ovis aries] diamond 168 54.3 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
28000688 28000688 PRJNA753151_S_NODE_230865_length_188_cov_1.551724_g228575_i0 PRJNA753151 230865 188 1.551724 2.91724112 Monodon monoceros 40151 Chordata Chordata 51.6 2.47e-6   NR TKC40856.1 40151 g228575 i0 68.8 0.51063829787234 32 10 51.1 0 35 130 8 39 TKC40856.1 hypothetical protein EI555_012628 [Monodon monoceros] diamond 96 51.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Monodontidae Monodon Monodon monoceros
28032138 28032138 PRJNA753151_S_NODE_304885_length_158_cov_1.956522_g302595_i0 PRJNA753151 304885 158 1.956522 3.09130476 Myodes glareolus 447135 Chordata Chordata 72 5.49e-13   NR KAK7827084.1 447135 g302595 i0 88.2 0.968354430379747 51 6 96.8 0 4 156 62 112 KAK7827084.1 hypothetical protein U0070_019880, partial [Myodes glareolus] diamond 153 72 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Cricetidae Myodes Myodes glareolus
28158571 28158571 PRJNA753151_S_NODE_289025_length_164_cov_1.115702_g286735_i0 PRJNA753151 289025 164 1.115702 1.82975128 Balaenoptera acutorostrata 9767 Chordata Chordata 45.8 0.00104   NR XP_057400032.1 9767 g286735 i0 51.2 2.35975609756098 43 19 75 1 3 125 402 444 XP_057400032.1 L-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X1 [Balaenoptera acutorostrata] diamond 387 45.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Balaenopteridae Balaenoptera Balaenoptera acutorostrata
28168240 28168240 PRJNA753151_S_NODE_134785_length_249_cov_2.621359_g132495_i0 PRJNA753151 134785 249 2.621359 6.52718391 root 1 Root_unresolved Root_unresolved 176 2.24e-50   NR XP_030110853.2 10090 g132495 i0 97.6 16 83 2 100 0 249 1 153 235 XP_030110853.2 uncharacterized protein Gm42427, partial [Mus musculus] diamond 3984 176 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
28221316 28221316 PRJNA753151_S_NODE_145086_length_241_cov_1.590909_g142796_i0 PRJNA753151 145086 241 1.590909 3.83409069 Branchiostoma belcheri 7741 Chordata Chordata 43.5 0.02   NR XP_019633230.1 7741 g142796 i0 45.7 3.02489626556017 46 25 57.3 0 23 160 958 1003 XP_019633230.1 PREDICTED: uncharacterized protein LOC109476669 isoform X1 [Branchiostoma belcheri] diamond 729 43.5 1 Eukaryota Opisthokonta Metazoa Chordata Leptocardii Amphioxiformes Branchiostomatidae Branchiostoma Branchiostoma belcheri
28726677 28726677 PRJNA753151_S_NODE_306627_length_158_cov_0.800000_g304337_i0 PRJNA753151 306627 158 0.8 1.264 Ranitomeya imitator 111125 Chordata Chordata 42.4 0.0158   NR CAJ0956274.1 111125 g304337 i0 54.5 2.25949367088608 33 15 62.7 0 99 1 1 33 CAJ0956274.1 unnamed protein product [Ranitomeya imitator] diamond 357 42.4 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Dendrobatidae Ranitomeya Ranitomeya imitator
28758186 28758186 PRJNA753151_S_NODE_128767_length_254_cov_3.412322_g126477_i0 PRJNA753151 128767 254 3.412322 8.66729788 Ovis ammon polii x Ovis aries 2918886 Chordata Chordata 63.9 1.17e-9   NR KAI4553901.1 2918886 g126477 i0 96.8 0.366141732283465 31 1 36.6 0 2 94 123 153 KAI4553901.1 hypothetical protein MJT46_016081 [Ovis ammon polii x Ovis aries] diamond 93 63.9 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis ammon polii x Ovis aries
28831136 28831136 PRJNA753151_S_NODE_146468_length_240_cov_1.370558_g144178_i0 PRJNA753151 146468 240 1.370558 3.2893392 Chordata 7711 Chordata Chordata 103 2.0099999999999994e-23   NR NXS19832.1 98133 g144178 i0 97.9 104.05 48 1 60 0 1 144 1613 1660 NXS19832.1 UBP34 hydrolase [Mystacornis crossleyi] diamond 24972 104 0.990384615384615 Eukaryota Opisthokonta Metazoa Chordata Aves Passeriformes Timaliidae Mystacornis Mystacornis crossleyi
29200461 29200461 PRJNA753151_S_NODE_280149_length_167_cov_1.766129_g277859_i0 PRJNA753151 280149 167 1.766129 2.94943543 Ovis ammon polii 230172 Chordata Chordata 63.5 5.98e-10   NR KAI4549852.1 230172 g277859 i0 61.4 0.790419161676647 44 17 79 0 165 34 153 196 KAI4549852.1 hypothetical protein MG293_002182 [Ovis ammon polii] diamond 132 63.5 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis ammon
29484195 29484195 PRJNA753151_S_NODE_109010_length_273_cov_2.543478_g106720_i0 PRJNA753151 109010 273 2.543478 6.94369494 Lynx pardinus 191816 Chordata Chordata 45.8 8.76e-4   NR VFV28578.1 191816 g106720 i0 54.2 4.81318681318681 48 19 49.5 2 237 103 24 71 VFV28578.1 Hypothetical predicted protein, partial [Lynx pardinus] diamond 1314 45.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Felidae Lynx Lynx pardinus
29800078 29800078 PRJNA753151_S_NODE_251971_length_178_cov_2.614815_g249681_i0 PRJNA753151 251971 178 2.614815 4.6543707 Marmota monax 9995 Chordata Chordata 70.9 1.91e-12   NR VTJ76886.1 9995 g249681 i0 75 0.876404494382023 52 13 87.6 0 8 163 647 698 VTJ76886.1 Hypothetical predicted protein [Marmota monax] diamond 156 70.9 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Sciuridae Marmota Marmota monax
29926677 29926677 PRJNA753151_S_NODE_121171_length_261_cov_2.500000_g118881_i0 PRJNA753151 121171 261 2.5 6.525 Eschrichtius robustus 9764 Chordata Chordata 42 0.0196   NR KAJ8780365.1 9764 g118881 i0 57.9 0.436781609195402 38 13 43.7 2 130 243 58 92 KAJ8780365.1 hypothetical protein J1605_011629 [Eschrichtius robustus] diamond 114 42 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Eschrichtiidae Eschrichtius Eschrichtius robustus
29926678 29926678 PRJNA753151_S_NODE_268071_length_172_cov_1.000000_g265781_i0 PRJNA753151 268071 172 1 1.72 Capra hircus 9925 Chordata Chordata 60.5 7.98e-9   NR XDB55594.1 9925 g265781 i0 100 0.453488372093023 26 0 45.3 0 58 135 21 46 XDB55594.1 hypothetical protein ABFV05_009210 [Capra hircus] diamond 78 60.5 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Capra Capra hircus
30084360 30084360 PRJNA753151_S_NODE_183412_length_214_cov_2.368421_g181122_i0 PRJNA753151 183412 214 2.368421 5.06842094 Eschrichtius robustus 9764 Chordata Chordata 77 3.26e-15   NR KAJ8787736.1 9764 g181122 i0 57.1 0.981308411214953 70 23 88.3 2 2 190 140 209 KAJ8787736.1 hypothetical protein J1605_022767 [Eschrichtius robustus] diamond 210 77 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Eschrichtiidae Eschrichtius Eschrichtius robustus
30179154 30179154 PRJNA753151_S_NODE_284932_length_165_cov_2.213115_g282642_i0 PRJNA753151 284932 165 2.213115 3.65163975 Rangifer tarandus platyrhynchus 3082113 Chordata Chordata 53.9 2.26e-7   NR CAI9178102.1 3082113 g282642 i0 69.8 0.781818181818182 43 12 78.2 1 151 23 52 93 CAI9178102.1 unnamed protein product [Rangifer tarandus platyrhynchus] diamond 129 53.9 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Rangifer Rangifer tarandus
30589935 30589935 PRJNA753151_S_NODE_149973_length_237_cov_2.355670_g147683_i0 PRJNA753151 149973 237 2.35567 5.5829379 Ovis aries 9940 Chordata Chordata 46.6 0.00148   NR XP_060269149.1 9940 g147683 i0 61.1 0.455696202531646 36 14 45.6 0 214 107 547 582 XP_060269149.1 periodic tryptophan protein 1 homolog isoform X1 [Ovis aries] diamond 108 46.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
30779603 30779603 PRJNA753151_S_NODE_218154_length_194_cov_4.006623_g215864_i0 PRJNA753151 218154 194 4.006623 7.77284862 Ailuropoda melanoleuca 9646 Chordata Chordata 43.5 0.00678   NR EFB23083.1 9646 g215864 i0 48.6 0.572164948453608 37 19 57.2 0 180 70 1 37 EFB23083.1 hypothetical protein PANDA_009119, partial [Ailuropoda melanoleuca] diamond 111 43.5 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Ursidae Ailuropoda Ailuropoda melanoleuca
30811183 30811183 PRJNA753151_S_NODE_129274_length_254_cov_1.492891_g126984_i0 PRJNA753151 129274 254 1.492891 3.79194314 Muntiacus reevesi 9886 Chordata Chordata 96.3 8.000000000000001e-23   NR XP_065791148.1 9886 g126984 i0 70 0.826771653543307 70 21 82.7 0 237 28 1 70 XP_065791148.1 LOW QUALITY PROTEIN: uncharacterized protein C12orf54 homolog [Muntiacus reevesi] diamond 210 96.3 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Muntiacus Muntiacus reevesi
31485048 31485048 PRJNA753151_S_NODE_204396_length_202_cov_1.377358_g202106_i0 PRJNA753151 204396 202 1.377358 2.78226316 Chordata 7711 Chordata Chordata 47.4 4.35e-4   NR AGJ71393.1 7782 g202106 i0 100 66.2376237623762 20 0 29.7 0 142 201 149 168 AGJ71393.1 Dlx3, partial [Leucoraja erinaceus] diamond 13380 47.4 1 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Rajiformes Rajidae Leucoraja Leucoraja erinaceus
31822748 31822748 PRJNA753151_S_NODE_174097_length_220_cov_2.288136_g171807_i0 PRJNA753151 174097 220 2.288136 5.0338992 Sousa chinensis 103600 Chordata Chordata 51.2 1.19e-6   NR TEA33753.1 103600 g171807 i0 76.7 1.32272727272727 30 7 40.9 0 85 174 8 37 TEA33753.1 hypothetical protein DBR06_SOUSAS12810114, partial [Sousa chinensis] diamond 291 51.2 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Sousa Sousa chinensis
31917814 31917814 PRJNA753151_S_NODE_116117_length_266_cov_2.192825_g113827_i0 PRJNA753151 116117 266 2.192825 5.8329145 Dama dama 30532 Chordata Chordata 56.6 4.9e-7   NR XP_060996717.1 30532 g113827 i0 73.5 0.383458646616541 34 6 35 1 202 110 217 250 XP_060996717.1 uncharacterized protein LOC133055585 [Dama dama] diamond 102 56.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Dama Dama dama
32044399 32044399 PRJNA753151_S_NODE_222378_length_192_cov_2.416107_g220088_i0 PRJNA753151 222378 192 2.416107 4.63892544 Bos mutus 72004 Chordata Chordata 73.6 2.55e-13   NR MXQ85773.1 72004 g220088 i0 97.1 0.53125 34 1 53.1 0 77 178 707 740 MXQ85773.1 hypothetical protein [Bos mutus] diamond 102 73.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos mutus
32107634 32107634 PRJNA753151_S_NODE_156378_length_232_cov_3.571429_g154088_i0 PRJNA753151 156378 232 3.571429 8.28571528 Pedionomus torquatus 227192 Chordata Chordata 81.6 6.6e-16   NR NWW44596.1 227192 g154088 i0 68.6 1.39655172413793 51 14 65.9 1 208 56 1240 1288 NWW44596.1 MEGF6 protein [Pedionomus torquatus] diamond 324 81.6 1 Eukaryota Opisthokonta Metazoa Chordata Aves Charadriiformes Pedionomidae Pedionomus Pedionomus torquatus
32361043 32361043 PRJNA753151_S_NODE_283539_length_166_cov_1.097561_g281249_i0 PRJNA753151 283539 166 1.097561 1.82195126 Eschrichtius robustus 9764 Chordata Chordata 51.6 8.7e-7   NR KAJ8782003.1 9764 g281249 i0 68.8 1.1566265060241 32 10 57.8 0 138 43 53 84 KAJ8782003.1 hypothetical protein J1605_010516 [Eschrichtius robustus] diamond 192 51.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Eschrichtiidae Eschrichtius Eschrichtius robustus
32582362 32582362 PRJNA753151_S_NODE_209399_length_199_cov_2.019231_g207109_i0 PRJNA753151 209399 199 2.019231 4.01826969 Ranitomeya imitator 111125 Chordata Chordata 63.5 9.67e-10   NR CAJ0933392.1 111125 g207109 i0 62.5 0.723618090452261 48 16 69.3 1 43 180 53 100 CAJ0933392.1 unnamed protein product [Ranitomeya imitator] diamond 144 63.5 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Dendrobatidae Ranitomeya Ranitomeya imitator

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;