RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA753151" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA753151 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5834262 5834262 PRJNA753151_S_NODE_39145_length_395_cov_2.539773_g36896_i0 PRJNA753151 39145 395 2.539773 10.03210335 root 1 Root_unresolved Root_unresolved 184 6.54e-52   NR AAD09565.1 4754 g36896 i0 66.4 239.718987341772 131 44 99.5 0 3 395 138 268 AAD09565.1 heat shock protein 70, partial [Pneumocystis carinii] diamond 94689 185 0.994594594594595 Eukaryota Opisthokonta Fungi Ascomycota Pneumocystomycetes Pneumocystales Pneumocystaceae Pneumocystis Pneumocystis carinii
29578910 29578910 PRJNA753151_S_NODE_117310_length_265_cov_1.418919_g115020_i0 PRJNA753151 117310 265 1.418919 3.76013535 Botrytis cinerea 40559 Fungi Fungi 52.8 1.44e-5   NR KAK6591826.1 40559 g115020 i0 64.3 0.475471698113208 42 14 47.5 1 139 14 196 236 KAK6591826.1 hypothetical protein H4I96_12103 [Botrytis cinerea] diamond 126 52.8 1 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Helotiales Sclerotiniaceae Botrytis Botrytis cinerea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;